Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AL138889.1-202ENST00000451317 3630 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AL136295.5-201ENST00000558468 4798 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 BARD1-210ENST00000613374 4096 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC012651.1-204ENST00000495723 3881 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 DACH2-202ENST00000373131 2418 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AL136526.1-201ENST00000624456 2203 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 SNORD56.1-201ENST00000362913 68 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 Y_RNA.205-201ENST00000364128 113 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 MTO1-201ENST00000370300 2961 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 PDZD11-202ENST00000374454 784 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 GGNBP1-201ENST00000374458 960 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 SNORA18-201ENST00000384416 132 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 KRTAP9-1-201ENST00000398470 753 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 U3.41-201ENST00000408711 219 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SKP54-201ENST00000410704 269 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 RPL36AP10-201ENST00000421785 322 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AL590483.1-201ENST00000441338 468 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 Z98751.2-201ENST00000468716 451 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC016304.1-201ENST00000476363 413 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL369P-201ENST00000477138 299 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 RPL36AP21-201ENST00000490372 323 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 RNA5SP290-201ENST00000517133 127 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC109631.1-201ENST00000559695 781 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF213-AS1-210ENST00000576590 541 ntTSL 4 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AP005058.1-201ENST00000580193 2975 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 snoZ6.3-201ENST00000583496 76 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR4777-201ENST00000583710 86 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 GGNBP1-206ENST00000618642 897 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 NEAT1_1.1-201ENST00000620348 120 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC004801.7-201ENST00000624535 2973 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC068205.3-201ENST00000636385 468 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 TMEM184C-201ENST00000296582 4178 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF135-203ENST00000401053 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 DHDDS-202ENST00000360009 3245 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF438-206ENST00000442986 3245 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC112243.1-201ENST00000623949 3851 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC004147.2-201ENST00000583224 3753 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 HPSE2-203ENST00000370552 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 EARS2-207ENST00000563459 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 RBM26-201ENST00000267229 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 TUBBP1-201ENST00000248151 1335 ntBASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 CD2BP2-201ENST00000305596 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 INPP5F-202ENST00000369080 2882 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 KRT18P59-202ENST00000534728 3338 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP3-3Q9BYR6 CYB561A3-202ENST00000426130 3205 ntTSL 5 BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 PHF20L1-206ENST00000395376 2236 ntTSL 5 BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 TCAF2-204ENST00000441159 5568 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 FAM53C-201ENST00000239906 4377 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 SEMA4D-211ENST00000438547 4824 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 EPB41L4A-211ENST00000621003 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 PAXIP1-201ENST00000397192 3711 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.57
KRTAP3-3Q9BYR6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 MROH7-203ENST00000395690 3413 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms