Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 MIR765-201ENST00000390226 114 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 OR1F12-201ENST00000402365 945 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 MIR1182-201ENST00000408363 97 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 RN7SKP213-201ENST00000410746 298 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 RPL23AP27-201ENST00000415161 451 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AL138785.1-201ENST00000425821 331 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 VTI1BP4-201ENST00000427516 527 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 BRWD1P3-201ENST00000428816 390 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 GAPDHP58-201ENST00000438477 1006 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 XKRY2-201ENST00000442362 1093 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AC104634.1-201ENST00000452720 462 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 UBA52P7-201ENST00000486088 380 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 RN7SKP82-201ENST00000516786 223 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AC013701.1-201ENST00000522657 465 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AC134349.2-201ENST00000535136 910 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 TAS2R6P-201ENST00000605022 826 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AL162574.1-201ENST00000615702 950 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AP002505.2-201ENST00000623585 696 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 HSPA8P18-201ENST00000439846 1928 ntBASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4AQ9BY43 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AC104964.3-201ENST00000606115 2860 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 MAPK10-328ENST00000641553 4009 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 RNA5SP507-201ENST00000363603 121 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 UBE2V1P11-201ENST00000411559 285 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 DDX39BP1-205ENST00000422507 192 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AC009784.1-201ENST00000426484 460 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 CLUHP1-201ENST00000435012 1190 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AL162388.1-201ENST00000450912 352 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AC005532.2-201ENST00000467154 373 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 RN7SL189P-201ENST00000468631 289 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AC097486.1-201ENST00000515331 210 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 RN7SKP260-201ENST00000516907 149 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 OR4A43P-201ENST00000532938 908 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 MTND4LP24-201ENST00000572277 291 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AC006946.3-201ENST00000609791 756 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AP005131.7-201ENST00000610087 611 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 CDRT1-208ENST00000630868 794 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 CFTRP2-201ENST00000634304 199 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 C4BPAP1-201ENST00000415474 1893 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 ADAM24P-201ENST00000398655 2101 ntBASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4AQ9BY43 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC006210.2-201ENST00000367074 1545 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms