Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
IFT140Q96RY7 FTH1P21-201ENST00000512179 511 ntBASIC7.54□□□□□ -1.2
IFT140Q96RY7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.54□□□□□ -1.2
IFT140Q96RY7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
IFT140Q96RY7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
IFT140Q96RY7 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
IFT140Q96RY7 AP001273.1-201ENST00000624493 3152 ntBASIC7.54□□□□□ -1.2
IFT140Q96RY7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
IFT140Q96RY7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
IFT140Q96RY7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC7.53□□□□□ -1.2
IFT140Q96RY7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
IFT140Q96RY7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
IFT140Q96RY7 MIR331-201ENST00000362302 94 ntBASIC7.53□□□□□ -1.2
IFT140Q96RY7 U3.35-201ENST00000408405 208 ntBASIC7.53□□□□□ -1.2
IFT140Q96RY7 AC093578.1-201ENST00000415219 368 ntBASIC7.53□□□□□ -1.2
IFT140Q96RY7 RPL7P2-201ENST00000427639 268 ntBASIC7.53□□□□□ -1.2
IFT140Q96RY7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.53□□□□□ -1.2
IFT140Q96RY7 ISCUP1-201ENST00000454451 448 ntBASIC7.53□□□□□ -1.2
IFT140Q96RY7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.53□□□□□ -1.2
IFT140Q96RY7 OR5BC1P-201ENST00000529327 739 ntBASIC7.53□□□□□ -1.2
IFT140Q96RY7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC7.53□□□□□ -1.2
IFT140Q96RY7 OR2L1P-202ENST00000641567 1023 ntBASIC7.53□□□□□ -1.2
IFT140Q96RY7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
IFT140Q96RY7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
IFT140Q96RY7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
IFT140Q96RY7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.53□□□□□ -1.2
IFT140Q96RY7 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
IFT140Q96RY7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC7.53□□□□□ -1.2
IFT140Q96RY7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
IFT140Q96RY7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
IFT140Q96RY7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
IFT140Q96RY7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
IFT140Q96RY7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
IFT140Q96RY7 EIF2S2P5-201ENST00000457635 968 ntBASIC7.52□□□□□ -1.21
IFT140Q96RY7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 AL161729.3-201ENST00000603533 673 ntBASIC7.52□□□□□ -1.21
IFT140Q96RY7 RNU4-89P-201ENST00000607443 133 ntBASIC7.52□□□□□ -1.21
IFT140Q96RY7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
IFT140Q96RY7 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
IFT140Q96RY7 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
IFT140Q96RY7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
IFT140Q96RY7 RNA5SP124-201ENST00000362739 110 ntBASIC7.51□□□□□ -1.21
IFT140Q96RY7 CGA-201ENST00000369582 729 ntTSL 5 BASIC7.51□□□□□ -1.21
IFT140Q96RY7 MRPL50P1-201ENST00000431951 384 ntBASIC7.51□□□□□ -1.21
IFT140Q96RY7 AL935212.3-201ENST00000450729 284 ntBASIC7.51□□□□□ -1.21
IFT140Q96RY7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC7.51□□□□□ -1.21
IFT140Q96RY7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.51□□□□□ -1.21
IFT140Q96RY7 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
IFT140Q96RY7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.51□□□□□ -1.21
IFT140Q96RY7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.51□□□□□ -1.21
IFT140Q96RY7 AL592182.3-201ENST00000642132 3304 ntBASIC7.51□□□□□ -1.21
IFT140Q96RY7 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
IFT140Q96RY7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
IFT140Q96RY7 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
IFT140Q96RY7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
IFT140Q96RY7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 RNA5SP130-201ENST00000364431 114 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 UBBP2-201ENST00000376781 231 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 MIR483-201ENST00000385070 76 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 AL035696.2-201ENST00000407941 709 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 AL356276.2-201ENST00000435919 558 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 AL353748.1-201ENST00000440753 474 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 snoU13.24-201ENST00000458998 104 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 RPS20P4-201ENST00000461659 355 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 SLC2A3P1-201ENST00000519666 1451 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
IFT140Q96RY7 AC093829.1-201ENST00000506662 1618 ntBASIC7.5□□□□□ -1.21
IFT140Q96RY7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
IFT140Q96RY7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
IFT140Q96RY7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
IFT140Q96RY7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
IFT140Q96RY7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.5□□□□□ -1.21
IFT140Q96RY7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
IFT140Q96RY7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AC015908.5-201ENST00000623289 343 ntBASIC7.49□□□□□ -1.21
IFT140Q96RY7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
IFT140Q96RY7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms