Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TAF13P2-201ENST00000416876 286 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC013267.1-201ENST00000458227 267 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 RN7SL165P-201ENST00000477476 291 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC010342.1-201ENST00000514047 877 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 IGLV3-6-201ENST00000523937 250 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF43Q68DV7 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 MIR4443-201ENST00000585052 53 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC103881.1-201ENST00000603476 538 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 LINC01739-205ENST00000641890 573 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF43Q68DV7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC105749.1-201ENST00000631338 2008 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 SAMM50P1-201ENST00000455403 1399 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 OR9G4-201ENST00000302957 984 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 RNU4-73P-201ENST00000363164 141 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 SNORA51.1-201ENST00000363243 140 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 RN7SKP275-201ENST00000364626 301 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 MIR1302-11-201ENST00000408051 138 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 MIR1302-9-201ENST00000408365 138 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 MIR1302-10-201ENST00000408734 138 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC245884.2-201ENST00000426257 404 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 TMX2P1-201ENST00000436507 708 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 AMYP1-201ENST00000440059 1023 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 TRIM60P16-201ENST00000444048 694 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 UBTFL6-201ENST00000477929 1024 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 RNF138P1-201ENST00000502765 546 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 WBP1LP4-201ENST00000505043 344 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC006960.3-201ENST00000561845 705 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 AL391840.1-201ENST00000571144 367 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 RN7SL208P-201ENST00000577964 296 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 BNIP3P26-201ENST00000600827 554 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 AP004372.1-201ENST00000604842 844 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 MIR1302-2-201ENST00000607096 138 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC106028.5-201ENST00000610332 395 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC112487.2-201ENST00000637950 304 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC099063.3-201ENST00000642066 185 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RNF43Q68DV7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RNF43Q68DV7 AC005332.9-201ENST00000620266 2921 ntBASIC6.7□□□□□ -1.34
RNF43Q68DV7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.69□□□□□ -1.34
RNF43Q68DV7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms