Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 Y_RNA.311-201ENST00000365068 96 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 RNU1-46P-201ENST00000384425 164 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 ZNF90P2-204ENST00000419323 1075 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AL035410.1-201ENST00000427409 427 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 RAB28P3-201ENST00000448325 597 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC026782.1-201ENST00000512952 449 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC027308.1-201ENST00000517993 110 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC020661.2-201ENST00000560114 134 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AL035413.2-201ENST00000604801 525 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC136475.10-201ENST00000620253 385 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 AC011455.2-201ENST00000599320 3336 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 MTND4P14-201ENST00000435799 1354 ntBASIC8.07□□□□□ -1.12
RC3H1Q5TC82 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.07□□□□□ -1.12
RC3H1Q5TC82 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC138393.1-206ENST00000540997 1886 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC008627.1-201ENST00000517511 1704 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 OR52B3P-201ENST00000314715 928 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 OR2M1P-201ENST00000318104 951 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 RNU6-621P-201ENST00000364752 109 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC018644.1-201ENST00000429934 551 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 ACTR3P2-201ENST00000439585 1257 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AL033528.1-201ENST00000453780 140 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC023141.9-201ENST00000458734 412 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 RPS4XP12-201ENST00000461747 709 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 KLRA1P-201ENST00000503499 986 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC090958.1-201ENST00000511122 351 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC105914.1-201ENST00000511798 226 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 Y_RNA.704-201ENST00000516851 102 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 RNU6-430P-201ENST00000517078 107 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 ARL2BPP5-201ENST00000523141 481 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC027544.3-201ENST00000535082 757 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 PSMB7P1-201ENST00000556349 514 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 MIR3176-201ENST00000582210 90 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC006116.10-201ENST00000591836 581 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 NRBF2P5-201ENST00000603087 788 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AP001521.2-201ENST00000608772 546 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AC090425.1-201ENST00000610007 140 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AL139089.1-201ENST00000620372 975 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AP003400.3-201ENST00000624904 346 ntBASIC8.06□□□□□ -1.12
RC3H1Q5TC82 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
RC3H1Q5TC82 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms