Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LTBQ06643 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 HMGB3P19-201ENST00000403971 560 ntBASIC4.9□□□□□ -1.63
LTBQ06643 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.9□□□□□ -1.63
LTBQ06643 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.9□□□□□ -1.63
LTBQ06643 SLC35E1P1-201ENST00000419313 864 ntBASIC4.9□□□□□ -1.63
LTBQ06643 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.9□□□□□ -1.63
LTBQ06643 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.9□□□□□ -1.63
LTBQ06643 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.9□□□□□ -1.63
LTBQ06643 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.9□□□□□ -1.63
LTBQ06643 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 RPS11P7-201ENST00000442125 465 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.9□□□□□ -1.63
LTBQ06643 AC044797.1-201ENST00000445744 679 ntBASIC4.9□□□□□ -1.63
LTBQ06643 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 TPT1P13-201ENST00000449760 499 ntBASIC4.9□□□□□ -1.63
LTBQ06643 RPL7P55-201ENST00000450522 746 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.9□□□□□ -1.63
LTBQ06643 RPS29P22-201ENST00000472363 168 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AC072052.1-201ENST00000496556 306 ntBASIC4.9□□□□□ -1.63
LTBQ06643 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.9□□□□□ -1.63
LTBQ06643 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.9□□□□□ -1.63
LTBQ06643 AC093770.1-201ENST00000511559 571 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AC092709.1-201ENST00000521355 1045 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AP000676.2-201ENST00000529711 301 ntBASIC4.9□□□□□ -1.63
LTBQ06643 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
LTBQ06643 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LTBQ06643 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.9□□□□□ -1.63
LTBQ06643 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.9□□□□□ -1.63
LTBQ06643 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.9□□□□□ -1.63
LTBQ06643 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 AC113368.1-201ENST00000603736 382 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AC002487.1-201ENST00000604565 994 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AC080013.6-201ENST00000606185 215 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AC133644.2-201ENST00000608142 540 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AC092954.1-201ENST00000609121 445 ntBASIC4.9□□□□□ -1.63
LTBQ06643 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 AC090617.9-201ENST00000623751 147 ntBASIC4.9□□□□□ -1.63
LTBQ06643 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 AC068620.4-201ENST00000636730 1182 ntBASIC4.9□□□□□ -1.63
LTBQ06643 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 AC083843.2-201ENST00000568248 6253 ntBASIC4.9□□□□□ -1.63
LTBQ06643 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.9□□□□□ -1.63
LTBQ06643 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
LTBQ06643 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LTBQ06643 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.9□□□□□ -1.63
LTBQ06643 AC092376.2-201ENST00000622621 4116 ntBASIC4.9□□□□□ -1.63
LTBQ06643 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.89□□□□□ -1.63
LTBQ06643 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.89□□□□□ -1.63
LTBQ06643 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LTBQ06643 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
LTBQ06643 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
LTBQ06643 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 AL442128.2-201ENST00000620246 1824 ntBASIC4.89□□□□□ -1.63
LTBQ06643 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LTBQ06643 RNU4-2-201ENST00000365668 141 ntBASIC4.89□□□□□ -1.63
LTBQ06643 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.89□□□□□ -1.63
LTBQ06643 PEX12P1-201ENST00000400284 1048 ntBASIC4.89□□□□□ -1.63
LTBQ06643 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.89□□□□□ -1.63
LTBQ06643 SEPT7P8-201ENST00000413308 775 ntBASIC4.89□□□□□ -1.63
LTBQ06643 VN1R42P-201ENST00000424651 344 ntBASIC4.89□□□□□ -1.63
LTBQ06643 TXNL1P1-201ENST00000429528 554 ntBASIC4.89□□□□□ -1.63
LTBQ06643 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.89□□□□□ -1.63
LTBQ06643 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.89□□□□□ -1.63
LTBQ06643 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.89□□□□□ -1.63
LTBQ06643 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.89□□□□□ -1.63
LTBQ06643 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.89□□□□□ -1.63
LTBQ06643 VN1R40P-201ENST00000455196 941 ntBASIC4.89□□□□□ -1.63
LTBQ06643 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.89□□□□□ -1.63
LTBQ06643 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.89□□□□□ -1.63
LTBQ06643 AC020779.1-201ENST00000478757 796 ntBASIC4.89□□□□□ -1.63
LTBQ06643 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.89□□□□□ -1.63
LTBQ06643 HMGB1P3-201ENST00000502802 616 ntBASIC4.89□□□□□ -1.63
LTBQ06643 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.89□□□□□ -1.63
LTBQ06643 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.89□□□□□ -1.63
LTBQ06643 HMGN1P9-201ENST00000515212 298 ntBASIC4.89□□□□□ -1.63
LTBQ06643 SNORA70.11-201ENST00000515987 138 ntBASIC4.89□□□□□ -1.63
LTBQ06643 SNORA70.13-201ENST00000516116 138 ntBASIC4.89□□□□□ -1.63
LTBQ06643 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.89□□□□□ -1.63
LTBQ06643 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LTBQ06643 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.89□□□□□ -1.63
LTBQ06643 AL049779.2-201ENST00000553847 315 ntBASIC4.89□□□□□ -1.63
LTBQ06643 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.89□□□□□ -1.63
LTBQ06643 OR1F2P-201ENST00000570470 933 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms