Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC068724.3-201ENST00000625906 87 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 AC099654.8-201ENST00000637757 681 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
TM4SF4P48230 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 AC125336.1-201ENST00000508893 2827 ntBASIC5.97□□□□□ -1.45
TM4SF4P48230 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.97□□□□□ -1.45
TM4SF4P48230 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TM4SF4P48230 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TM4SF4P48230 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TM4SF4P48230 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TM4SF4P48230 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
TM4SF4P48230 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
TM4SF4P48230 CASC19-260ENST00000641828 2001 ntBASIC5.96□□□□□ -1.45
TM4SF4P48230 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
TM4SF4P48230 KARSP3-201ENST00000571212 1504 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM4SF4P48230 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM4SF4P48230 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.96□□□□□ -1.46
TM4SF4P48230 VTA1P1-201ENST00000414044 866 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 HYALP1-201ENST00000417674 1279 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.96□□□□□ -1.46
TM4SF4P48230 OR10T1P-201ENST00000424327 947 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC234779.1-201ENST00000425910 285 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 ELOCP6-201ENST00000429066 328 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 MTND2P2-201ENST00000434633 945 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.96□□□□□ -1.46
TM4SF4P48230 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.96□□□□□ -1.46
TM4SF4P48230 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.96□□□□□ -1.46
TM4SF4P48230 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.96□□□□□ -1.46
TM4SF4P48230 AL096803.2-201ENST00000450032 677 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.96□□□□□ -1.46
TM4SF4P48230 TVP23BP2-201ENST00000455082 615 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 ELOCP12-201ENST00000458706 328 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 RPL7P48-201ENST00000461513 746 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 RPL7AP28-201ENST00000464513 571 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC021106.1-201ENST00000509020 1058 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC010376.1-201ENST00000522101 334 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM4SF4P48230 AC090666.1-201ENST00000578241 445 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.96□□□□□ -1.46
TM4SF4P48230 AC011492.1-201ENST00000600023 315 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AL109618.2-201ENST00000605527 211 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC026979.4-201ENST00000606555 645 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.96□□□□□ -1.46
TM4SF4P48230 AL392048.1-201ENST00000613946 534 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AL512427.1-201ENST00000618593 349 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC023510.2-201ENST00000622162 746 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TM4SF4P48230 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM4SF4P48230 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM4SF4P48230 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM4SF4P48230 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TM4SF4P48230 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TM4SF4P48230 AC022164.1-201ENST00000568767 2673 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 AC083837.1-201ENST00000565297 2994 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.96□□□□□ -1.46
TM4SF4P48230 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.96□□□□□ -1.46
TM4SF4P48230 AC016745.2-201ENST00000608834 3443 ntBASIC5.96□□□□□ -1.46
TM4SF4P48230 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TM4SF4P48230 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TM4SF4P48230 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TM4SF4P48230 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF4P48230 AC097461.1-201ENST00000568928 2821 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.95□□□□□ -1.46
TM4SF4P48230 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF4P48230 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
TM4SF4P48230 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TM4SF4P48230 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF4P48230 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.95□□□□□ -1.46
TM4SF4P48230 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TM4SF4P48230 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TM4SF4P48230 AC233289.1-201ENST00000403700 508 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 LINC01881-201ENST00000416103 412 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 OR51A6P-201ENST00000418680 1004 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 CENPIP1-201ENST00000425713 902 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.95□□□□□ -1.46
TM4SF4P48230 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF4P48230 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.95□□□□□ -1.46
TM4SF4P48230 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.95□□□□□ -1.46
TM4SF4P48230 GTF2H2B-203ENST00000508065 1432 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.95□□□□□ -1.46
TM4SF4P48230 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.95□□□□□ -1.46
TM4SF4P48230 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF4P48230 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.95□□□□□ -1.46
TM4SF4P48230 MIR4715-201ENST00000584117 79 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.95□□□□□ -1.46
TM4SF4P48230 DHX40P1-201ENST00000588725 1412 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.95□□□□□ -1.46
TM4SF4P48230 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF4P48230 AC103792.1-201ENST00000603591 919 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 OR52H1-202ENST00000641796 1061 ntBASIC5.95□□□□□ -1.46
TM4SF4P48230 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TM4SF4P48230 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF4P48230 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TM4SF4P48230 AC100871.1-201ENST00000507871 1456 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms