Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.49□□□□□ -1.69
RFC3P40938 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.49□□□□□ -1.69
RFC3P40938 RPL23AP56-201ENST00000460778 453 ntBASIC4.49□□□□□ -1.69
RFC3P40938 RPL23AP72-201ENST00000492447 435 ntBASIC4.49□□□□□ -1.69
RFC3P40938 GAPDHP56-201ENST00000506031 988 ntBASIC4.49□□□□□ -1.69
RFC3P40938 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.49□□□□□ -1.69
RFC3P40938 HMGB3P16-201ENST00000508037 287 ntBASIC4.49□□□□□ -1.69
RFC3P40938 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.49□□□□□ -1.69
RFC3P40938 RN7SKP46-201ENST00000515942 234 ntBASIC4.49□□□□□ -1.69
RFC3P40938 AC100784.1-201ENST00000522790 310 ntBASIC4.49□□□□□ -1.69
RFC3P40938 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.49□□□□□ -1.69
RFC3P40938 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.49□□□□□ -1.69
RFC3P40938 AC008147.3-201ENST00000548666 354 ntBASIC4.49□□□□□ -1.69
RFC3P40938 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.49□□□□□ -1.69
RFC3P40938 AC063949.1-201ENST00000552900 865 ntBASIC4.49□□□□□ -1.69
RFC3P40938 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.49□□□□□ -1.69
RFC3P40938 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.49□□□□□ -1.69
RFC3P40938 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.49□□□□□ -1.69
RFC3P40938 AC011270.1-201ENST00000558606 583 ntBASIC4.49□□□□□ -1.69
RFC3P40938 NDUFB4P11-201ENST00000560510 395 ntBASIC4.49□□□□□ -1.69
RFC3P40938 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.49□□□□□ -1.69
RFC3P40938 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.49□□□□□ -1.69
RFC3P40938 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.49□□□□□ -1.69
RFC3P40938 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.49□□□□□ -1.69
RFC3P40938 AP001521.2-201ENST00000608772 546 ntBASIC4.49□□□□□ -1.69
RFC3P40938 OR7M1P-201ENST00000608946 533 ntBASIC4.49□□□□□ -1.69
RFC3P40938 MIR7703-201ENST00000620784 77 ntBASIC4.49□□□□□ -1.69
RFC3P40938 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.49□□□□□ -1.69
RFC3P40938 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.49□□□□□ -1.69
RFC3P40938 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RFC3P40938 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RFC3P40938 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.49□□□□□ -1.69
RFC3P40938 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.49□□□□□ -1.69
RFC3P40938 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RFC3P40938 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFC3P40938 RLIMP2-201ENST00000427891 1563 ntBASIC4.48□□□□□ -1.69
RFC3P40938 ECM1P2-201ENST00000503354 1577 ntBASIC4.48□□□□□ -1.69
RFC3P40938 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.48□□□□□ -1.69
RFC3P40938 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 LINC01109-201ENST00000603837 3081 ntBASIC4.48□□□□□ -1.69
RFC3P40938 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RFC3P40938 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RFC3P40938 RNVU1-6-201ENST00000364688 164 ntBASIC4.48□□□□□ -1.69
RFC3P40938 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 LRRC37BP1-201ENST00000398851 714 ntBASIC4.48□□□□□ -1.69
RFC3P40938 AL357515.1-201ENST00000402967 542 ntBASIC4.48□□□□□ -1.69
RFC3P40938 RNA5SP113-201ENST00000410486 84 ntBASIC4.48□□□□□ -1.69
RFC3P40938 AC069213.2-201ENST00000420238 366 ntBASIC4.48□□□□□ -1.69
RFC3P40938 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.48□□□□□ -1.69
RFC3P40938 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.48□□□□□ -1.69
RFC3P40938 HMGB3P10-201ENST00000434734 572 ntBASIC4.48□□□□□ -1.69
RFC3P40938 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.48□□□□□ -1.69
RFC3P40938 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.48□□□□□ -1.69
RFC3P40938 CYCSP24-201ENST00000445119 316 ntBASIC4.48□□□□□ -1.69
RFC3P40938 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.48□□□□□ -1.69
RFC3P40938 NDUFA12P1-201ENST00000455914 406 ntBASIC4.48□□□□□ -1.69
RFC3P40938 RPL7AP10-201ENST00000481016 791 ntBASIC4.48□□□□□ -1.69
RFC3P40938 AC116562.1-201ENST00000485355 781 ntBASIC4.48□□□□□ -1.69
RFC3P40938 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.48□□□□□ -1.69
RFC3P40938 AC093720.1-201ENST00000505681 714 ntBASIC4.48□□□□□ -1.69
RFC3P40938 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.48□□□□□ -1.69
RFC3P40938 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.48□□□□□ -1.69
RFC3P40938 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.48□□□□□ -1.69
RFC3P40938 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.48□□□□□ -1.69
RFC3P40938 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.48□□□□□ -1.69
RFC3P40938 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.48□□□□□ -1.69
RFC3P40938 AC027369.5-201ENST00000533838 755 ntBASIC4.48□□□□□ -1.69
RFC3P40938 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.48□□□□□ -1.69
RFC3P40938 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.48□□□□□ -1.69
RFC3P40938 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.48□□□□□ -1.69
RFC3P40938 AC091042.1-201ENST00000579213 173 ntBASIC4.48□□□□□ -1.69
RFC3P40938 ELOCP28-201ENST00000590044 317 ntBASIC4.48□□□□□ -1.69
RFC3P40938 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.48□□□□□ -1.69
RFC3P40938 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFC3P40938 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.47□□□□□ -1.69
RFC3P40938 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC3P40938 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RFC3P40938 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC3P40938 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC3P40938 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFC3P40938 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RFC3P40938 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC3P40938 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC3P40938 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFC3P40938 RNU6-398P-201ENST00000384143 109 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms