Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC074029.1-201ENST00000552531 1044 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF4P23510 MTCYBP27-201ENST00000555160 670 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 AC007956.1-201ENST00000555623 542 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 GTF2IP8-201ENST00000560687 584 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.16□□□□□ -1.58
TNFSF4P23510 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFSF4P23510 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.16□□□□□ -1.58
TNFSF4P23510 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFSF4P23510 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.16□□□□□ -1.58
TNFSF4P23510 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF4P23510 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFSF4P23510 AC096861.1-201ENST00000616652 240 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFSF4P23510 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.16□□□□□ -1.58
TNFSF4P23510 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TNFSF4P23510 GNL2P1-201ENST00000451274 2190 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF4P23510 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF4P23510 AC005725.1-201ENST00000577346 2607 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF4P23510 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFSF4P23510 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFSF4P23510 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF4P23510 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF4P23510 RBMY1HP-201ENST00000382759 1389 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 AL161756.3-201ENST00000641216 2071 ntBASIC5.16□□□□□ -1.58
TNFSF4P23510 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF4P23510 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.15□□□□□ -1.58
TNFSF4P23510 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.15□□□□□ -1.58
TNFSF4P23510 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 CYP1D1P-201ENST00000416662 1433 ntBASIC5.15□□□□□ -1.58
TNFSF4P23510 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.15□□□□□ -1.58
TNFSF4P23510 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF4P23510 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.15□□□□□ -1.58
TNFSF4P23510 QRSL1P1-201ENST00000400977 1540 ntBASIC5.15□□□□□ -1.58
TNFSF4P23510 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFSF4P23510 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFSF4P23510 Y_RNA.192-201ENST00000363977 102 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF4P23510 SNRPEP6-201ENST00000407465 277 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 RN7SKP166-201ENST00000410812 305 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AC107081.1-201ENST00000414975 361 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 CEACAMP1-201ENST00000434624 1035 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AC023141.3-201ENST00000436698 278 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 MTCO2P20-201ENST00000437339 673 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 NDUFA5P7-201ENST00000452914 242 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 RPL37P23-201ENST00000492641 294 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 PFN1P8-201ENST00000497012 543 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 LSM3P4-201ENST00000502948 309 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC008837.2-201ENST00000513076 418 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 RNU6-1225P-201ENST00000516336 65 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 RN7SKP35-201ENST00000517210 151 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF4P23510 MIR4512-201ENST00000583257 77 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AC095055.1-201ENST00000603472 1113 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AP003392.5-201ENST00000607857 415 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 MIR6071-201ENST00000616741 78 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.15□□□□□ -1.59
TNFSF4P23510 AC073488.3-201ENST00000631611 778 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 AF001550.2-201ENST00000636643 217 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 MIR1322-201ENST00000638013 71 ntBASIC5.15□□□□□ -1.59
TNFSF4P23510 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF4P23510 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF4P23510 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF4P23510 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms