Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 RN7SKP78-201ENST00000364711 318 ntBASIC5.85□□□□□ -1.47
XPAP23025 RNU6-157P-201ENST00000383957 107 ntBASIC5.85□□□□□ -1.47
XPAP23025 RNU4-31P-201ENST00000384211 141 ntBASIC5.85□□□□□ -1.47
XPAP23025 SNORA70.9-201ENST00000384370 135 ntBASIC5.85□□□□□ -1.47
XPAP23025 RPL23AP17-201ENST00000401064 499 ntBASIC5.85□□□□□ -1.47
XPAP23025 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.85□□□□□ -1.47
XPAP23025 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.85□□□□□ -1.47
XPAP23025 MTND6P12-201ENST00000428247 522 ntBASIC5.85□□□□□ -1.47
XPAP23025 RPL12P16-201ENST00000431098 498 ntBASIC5.85□□□□□ -1.47
XPAP23025 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 MTCO3P5-201ENST00000433620 714 ntBASIC5.85□□□□□ -1.47
XPAP23025 RPS12P17-201ENST00000438591 377 ntBASIC5.85□□□□□ -1.47
XPAP23025 AL353093.1-201ENST00000441292 436 ntBASIC5.85□□□□□ -1.47
XPAP23025 AC073648.4-201ENST00000442655 781 ntBASIC5.85□□□□□ -1.47
XPAP23025 AL161636.2-201ENST00000445179 927 ntBASIC5.85□□□□□ -1.47
XPAP23025 AC022431.1-201ENST00000450941 438 ntBASIC5.85□□□□□ -1.47
XPAP23025 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 UBFD1P1-201ENST00000473259 814 ntBASIC5.85□□□□□ -1.47
XPAP23025 AC108734.3-201ENST00000481241 1165 ntBASIC5.85□□□□□ -1.47
XPAP23025 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.85□□□□□ -1.47
XPAP23025 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 SCARNA6.1-201ENST00000516989 238 ntBASIC5.85□□□□□ -1.47
XPAP23025 AC083923.1-201ENST00000523708 376 ntBASIC5.85□□□□□ -1.47
XPAP23025 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 AC010198.2-201ENST00000550612 259 ntBASIC5.85□□□□□ -1.47
XPAP23025 NBEAP1-201ENST00000554452 979 ntBASIC5.85□□□□□ -1.47
XPAP23025 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.85□□□□□ -1.47
XPAP23025 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.85□□□□□ -1.47
XPAP23025 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.85□□□□□ -1.47
XPAP23025 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 AP005431.1-201ENST00000618479 319 ntBASIC5.85□□□□□ -1.47
XPAP23025 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
XPAP23025 MIR193BHG-214ENST00000641765 509 ntBASIC5.85□□□□□ -1.47
XPAP23025 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 AC138393.1-206ENST00000540997 1886 ntBASIC5.85□□□□□ -1.47
XPAP23025 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
XPAP23025 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
XPAP23025 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
XPAP23025 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.84□□□□□ -1.47
XPAP23025 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
XPAP23025 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
XPAP23025 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
XPAP23025 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.84□□□□□ -1.47
XPAP23025 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
XPAP23025 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
XPAP23025 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
XPAP23025 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
XPAP23025 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
XPAP23025 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
XPAP23025 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
XPAP23025 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
XPAP23025 MIR323A-201ENST00000362199 86 ntBASIC5.84□□□□□ -1.47
XPAP23025 Y_RNA.192-201ENST00000363977 102 ntBASIC5.84□□□□□ -1.47
XPAP23025 RNU1-146P-201ENST00000364015 165 ntBASIC5.84□□□□□ -1.47
XPAP23025 RNA5SP500-201ENST00000364486 119 ntBASIC5.84□□□□□ -1.47
XPAP23025 SNORD116-4-201ENST00000384733 96 ntBASIC5.84□□□□□ -1.47
XPAP23025 SNORA17A-201ENST00000391185 133 ntBASIC5.84□□□□□ -1.47
XPAP23025 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
XPAP23025 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.84□□□□□ -1.47
XPAP23025 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.84□□□□□ -1.47
XPAP23025 TCEA1P4-201ENST00000415066 844 ntBASIC5.84□□□□□ -1.47
XPAP23025 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.84□□□□□ -1.47
XPAP23025 TIMM9P2-201ENST00000419324 266 ntBASIC5.84□□□□□ -1.47
XPAP23025 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.84□□□□□ -1.47
XPAP23025 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.84□□□□□ -1.47
XPAP23025 RPL34P3-201ENST00000421454 338 ntBASIC5.84□□□□□ -1.47
XPAP23025 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
XPAP23025 AC234781.2-201ENST00000426370 994 ntBASIC5.84□□□□□ -1.47
XPAP23025 AC104843.2-201ENST00000427666 297 ntBASIC5.84□□□□□ -1.47
XPAP23025 AC022022.1-201ENST00000430304 178 ntBASIC5.84□□□□□ -1.47
XPAP23025 HMGB3P24-201ENST00000433260 622 ntBASIC5.84□□□□□ -1.47
XPAP23025 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.84□□□□□ -1.47
XPAP23025 AC096638.2-201ENST00000434965 711 ntBASIC5.84□□□□□ -1.47
XPAP23025 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
XPAP23025 AC016772.1-201ENST00000444170 1261 ntBASIC5.84□□□□□ -1.47
XPAP23025 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.84□□□□□ -1.47
XPAP23025 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms