Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC012468.1-201ENST00000604888 430 ntBASIC2.76□□□□□ -1.97
APOBP04114 U6.105-201ENST00000637379 88 ntBASIC2.76□□□□□ -1.97
APOBP04114 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
APOBP04114 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 MAPK10-372ENST00000641954 3413 ntBASIC2.76□□□□□ -1.97
APOBP04114 AL355852.1-201ENST00000454081 1771 ntBASIC2.76□□□□□ -1.97
APOBP04114 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
APOBP04114 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 AL121950.1-201ENST00000624993 2077 ntBASIC2.76□□□□□ -1.97
APOBP04114 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
APOBP04114 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC2.76□□□□□ -1.97
APOBP04114 EIF4A1P3-201ENST00000411521 244 ntBASIC2.76□□□□□ -1.97
APOBP04114 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC2.76□□□□□ -1.97
APOBP04114 AC022133.1-201ENST00000490961 571 ntBASIC2.76□□□□□ -1.97
APOBP04114 RNU6-352P-201ENST00000516908 107 ntBASIC2.76□□□□□ -1.97
APOBP04114 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC2.76□□□□□ -1.97
APOBP04114 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC2.76□□□□□ -1.97
APOBP04114 AL391261.4-201ENST00000616012 481 ntBASIC2.76□□□□□ -1.97
APOBP04114 MIR6500-201ENST00000622700 86 ntBASIC2.76□□□□□ -1.97
APOBP04114 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
APOBP04114 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 ANAPC1P1-201ENST00000426186 2145 ntBASIC2.76□□□□□ -1.97
APOBP04114 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC2.76□□□□□ -1.97
APOBP04114 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC2.76□□□□□ -1.97
APOBP04114 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
APOBP04114 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC2.76□□□□□ -1.97
APOBP04114 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.76□□□□□ -1.97
APOBP04114 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC2.76□□□□□ -1.97
APOBP04114 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
APOBP04114 MAPK10-371ENST00000641952 5209 ntBASIC2.76□□□□□ -1.97
APOBP04114 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 TET1P1-201ENST00000426627 2301 ntBASIC2.76□□□□□ -1.97
APOBP04114 AC012213.2-201ENST00000562917 4597 ntBASIC2.76□□□□□ -1.97
APOBP04114 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC2.76□□□□□ -1.97
APOBP04114 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
APOBP04114 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
APOBP04114 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 USP45-204ENST00000369233 2514 ntTSL 5 BASIC2.76□□□□□ -1.97
APOBP04114 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 ARAFP1-201ENST00000422172 605 ntBASIC2.76□□□□□ -1.97
APOBP04114 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.76□□□□□ -1.97
APOBP04114 NOTCH2P1-201ENST00000443481 624 ntBASIC2.76□□□□□ -1.97
APOBP04114 HSPD1P15-201ENST00000505573 1122 ntBASIC2.76□□□□□ -1.97
APOBP04114 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC2.76□□□□□ -1.97
APOBP04114 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC2.76□□□□□ -1.97
APOBP04114 AC069061.3-201ENST00000582254 823 ntBASIC2.76□□□□□ -1.97
APOBP04114 PRPF19P1-201ENST00000584766 898 ntBASIC2.76□□□□□ -1.97
APOBP04114 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC2.76□□□□□ -1.97
APOBP04114 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOBP04114 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 LPP-208ENST00000448637 5835 ntTSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 AL035079.1-201ENST00000405210 287 ntBASIC2.75□□□□□ -1.97
APOBP04114 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC2.75□□□□□ -1.97
APOBP04114 OR8F1P-201ENST00000425243 930 ntBASIC2.75□□□□□ -1.97
APOBP04114 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.75□□□□□ -1.97
APOBP04114 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC2.75□□□□□ -1.97
APOBP04114 PARP4P3-201ENST00000510265 317 ntBASIC2.75□□□□□ -1.97
APOBP04114 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC2.75□□□□□ -1.97
APOBP04114 AC107016.1-201ENST00000550463 337 ntBASIC2.75□□□□□ -1.97
APOBP04114 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.75□□□□□ -1.97
APOBP04114 AL442067.2-201ENST00000614033 363 ntBASIC2.75□□□□□ -1.97
APOBP04114 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
APOBP04114 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
APOBP04114 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 Z98745.1-201ENST00000402553 494 ntBASIC2.75□□□□□ -1.97
APOBP04114 RPS29P7-201ENST00000439662 171 ntBASIC2.75□□□□□ -1.97
APOBP04114 SCARNA14-201ENST00000516903 136 ntBASIC2.75□□□□□ -1.97
APOBP04114 AP001804.2-201ENST00000533932 910 ntBASIC2.75□□□□□ -1.97
APOBP04114 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 CR392039.5-201ENST00000623201 510 ntBASIC2.75□□□□□ -1.97
APOBP04114 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 AL031119.1-201ENST00000404707 1879 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms