Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC084783.1-201ENST00000565846 910 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 MIR4420-201ENST00000583944 77 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 MIR8084-201ENST00000614105 89 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 OR56B2P-202ENST00000641377 2453 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RAPGEF3O95398 AL731566.1-201ENST00000620490 1937 ntBASIC7.44□□□□□ -1.22
RAPGEF3O95398 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC7.44□□□□□ -1.22
RAPGEF3O95398 ICE2P1-201ENST00000512800 1849 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RAPGEF3O95398 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RAPGEF3O95398 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RAPGEF3O95398 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.43□□□□□ -1.22
RAPGEF3O95398 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RAPGEF3O95398 RN7SKP153-201ENST00000365026 316 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 VN1R51P-201ENST00000411675 945 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 AL024507.1-201ENST00000412741 274 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 FHP1-201ENST00000442741 703 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC7.43□□□□□ -1.22
RAPGEF3O95398 AC116562.1-201ENST00000485355 781 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 UBE2V1P12-201ENST00000503954 474 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 AC007016.1-201ENST00000512110 244 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 AC022360.1-201ENST00000521058 340 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.43□□□□□ -1.22
RAPGEF3O95398 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.43□□□□□ -1.22
RAPGEF3O95398 BNIP3P38-201ENST00000601117 544 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 AC100847.1-201ENST00000611316 481 ntBASIC7.43□□□□□ -1.22
RAPGEF3O95398 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
RAPGEF3O95398 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RAPGEF3O95398 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RAPGEF3O95398 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RAPGEF3O95398 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.43□□□□□ -1.22
RAPGEF3O95398 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.43□□□□□ -1.22
RAPGEF3O95398 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
RAPGEF3O95398 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RAPGEF3O95398 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RAPGEF3O95398 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC017079.1-201ENST00000333650 415 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RAPGEF3O95398 U3.28-201ENST00000391249 210 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 RPL17P50-201ENST00000396131 546 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 RNA5SP251-201ENST00000410614 137 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 RPS3AP25-201ENST00000411660 793 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 RANP4-201ENST00000413361 655 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC114755.2-201ENST00000413520 361 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AL358176.3-201ENST00000420757 454 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 UQCRBP1-201ENST00000421129 336 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 MTCYBP15-201ENST00000433123 1127 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 PTP4A1P3-201ENST00000433661 420 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC245517.2-201ENST00000442890 346 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RAPGEF3O95398 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC091057.3-201ENST00000602684 733 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC099654.8-201ENST00000637757 681 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AL645568.2-201ENST00000432815 1337 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RAPGEF3O95398 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RAPGEF3O95398 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RAPGEF3O95398 RBPJP2-201ENST00000618187 1444 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 TCP1P3-201ENST00000414406 1498 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 AL359955.1-201ENST00000455242 3275 ntBASIC7.42□□□□□ -1.22
RAPGEF3O95398 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
RAPGEF3O95398 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RAPGEF3O95398 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RAPGEF3O95398 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RAPGEF3O95398 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
RAPGEF3O95398 RN7SKP280-201ENST00000364196 304 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 GNG5P2-201ENST00000372054 207 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 Z86062.1-201ENST00000406773 777 ntBASIC7.41□□□□□ -1.22
RAPGEF3O95398 TBCAP2-201ENST00000416175 326 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms