Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC026688.1-201ENST00000520639 1168 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC28A1O00337 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC28A1O00337 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC28A1O00337 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC28A1O00337 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC28A1O00337 AC011447.4-201ENST00000587562 111 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 IMMP1LP3-201ENST00000604197 224 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 AC005377.1-201ENST00000605126 456 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 AC012414.7-202ENST00000622705 1090 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC28A1O00337 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SLC28A1O00337 AC119674.1-212ENST00000641155 993 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SLC28A1O00337 AC139713.2-215ENST00000641428 5037 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
SLC28A1O00337 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC28A1O00337 THAP12P4-201ENST00000528321 2266 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 AC008549.2-201ENST00000333482 706 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 AL589826.1-201ENST00000340697 249 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 UBBP2-201ENST00000376781 231 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 Z97832.1-201ENST00000402490 328 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 MIR1286-201ENST00000408112 78 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 RANP4-201ENST00000413361 655 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC28A1O00337 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC28A1O00337 RGS17P1-201ENST00000423358 553 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC28A1O00337 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SLC28A1O00337 AC245047.2-201ENST00000441060 530 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 OTX2P1-201ENST00000450956 354 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 AL606490.1-201ENST00000452266 765 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC28A1O00337 SNRPCP2-201ENST00000504370 475 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 RNU6-1308P-201ENST00000516817 103 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC28A1O00337 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC28A1O00337 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC28A1O00337 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC28A1O00337 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC28A1O00337 RNF138P2-201ENST00000603490 592 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC28A1O00337 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC28A1O00337 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.73□□□□□ -1.65
SLC28A1O00337 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC28A1O00337 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC28A1O00337 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
SLC28A1O00337 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC28A1O00337 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SLC28A1O00337 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SLC28A1O00337 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC28A1O00337 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC28A1O00337 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SLC28A1O00337 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 RNU6-40P-201ENST00000384254 107 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 RNU6-532P-201ENST00000384318 107 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 U3.25-201ENST00000391209 220 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 AL512422.1-201ENST00000407033 553 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC28A1O00337 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AC023512.1-201ENST00000444513 499 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 FAR2P1-206ENST00000449736 709 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AL591363.1-201ENST00000450091 483 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AC243772.1-201ENST00000451620 410 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 RN7SL97P-201ENST00000486780 299 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 RFPL4AP5-201ENST00000514977 504 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AL671862.1-201ENST00000515851 349 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 HIGD1AP18-201ENST00000520730 278 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms