Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 KNOP1P3-201ENST00000446933 426 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 RPS29P33-201ENST00000456717 146 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AL049874.2-201ENST00000492636 288 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 BTF3P13-201ENST00000513224 490 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AC021006.3-201ENST00000530771 192 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 MIR4330-201ENST00000579077 105 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 ELOCP28-201ENST00000590044 317 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AC006116.7-201ENST00000590141 756 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 BNIP3P35-201ENST00000604530 490 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AC025016.1-201ENST00000616746 682 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AL645927.2-201ENST00000618350 349 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 RMST_5.1-201ENST00000618704 126 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 AC007996.1-201ENST00000620414 2821 ntBASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC6Q9UBN7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 RNA5SP428-201ENST00000365129 132 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 PTGES3P2-201ENST00000407942 482 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 ELOCP3-201ENST00000439303 348 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 EIF2S2P5-201ENST00000457635 968 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 RPS12P31-201ENST00000491419 398 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 MTATP6P9-201ENST00000515039 680 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 RFPL4AP3-201ENST00000515267 345 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC067904.2-201ENST00000517322 1283 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 HMGB1P46-201ENST00000520062 610 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 EDDM3DP-201ENST00000554692 434 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC079075.1-201ENST00000559543 878 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC009117.1-201ENST00000563948 554 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC126365.2-201ENST00000580630 379 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AL031320.1-201ENST00000604177 357 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 BNIP3P41-202ENST00000616656 861 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AP000943.4-201ENST00000622912 357 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC010872.1-201ENST00000624225 675 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC019080.5-201ENST00000624891 757 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 TTC39DP-201ENST00000416781 1688 ntBASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC6Q9UBN7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC010132.2-201ENST00000295493 1043 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 RN7SKP74-201ENST00000362849 309 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 RNVU1-6-201ENST00000364688 164 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 OR13C3-201ENST00000374781 1108 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 GAPDHP15-201ENST00000398586 975 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 RPL10P10-201ENST00000403509 664 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 RANP4-201ENST00000413361 655 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AL627224.1-201ENST00000448334 444 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 RN7SL244P-201ENST00000493405 297 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC140172.1-201ENST00000502928 141 ntBASIC5.73□□□□□ -1.49
HDAC6Q9UBN7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms