Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AC098826.1-201ENST00000433943 471 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS11Q9H270 RPS24P1-201ENST00000438550 371 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 ARF4P4-201ENST00000439608 520 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 DNAJA1P5-201ENST00000440278 943 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC073052.1-201ENST00000440417 714 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 FTLP8-201ENST00000446770 267 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC097359.1-201ENST00000447946 463 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 RNU7-27P-201ENST00000459281 62 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 RPL7P16-201ENST00000479738 738 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 ZNF519P4-201ENST00000514008 125 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 CR383658.1-201ENST00000514609 734 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 MIR2117-201ENST00000516780 80 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC020937.1-201ENST00000519677 1013 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 OR4A43P-201ENST00000532938 908 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC036111.2-201ENST00000533247 901 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS11Q9H270 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS11Q9H270 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AC069366.1-201ENST00000583159 838 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC012254.4-201ENST00000588843 273 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AL021707.7-201ENST00000607991 416 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC007349.4-201ENST00000608114 532 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 OR2BH1P-201ENST00000608850 864 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 PART1_2.1-201ENST00000612397 250 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 U6atac.1-201ENST00000616025 117 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 CASC19-274ENST00000642018 970 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS11Q9H270 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS11Q9H270 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
VPS11Q9H270 RBMY1HP-201ENST00000382759 1389 ntBASIC5.89□□□□□ -1.47
VPS11Q9H270 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS11Q9H270 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS11Q9H270 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS11Q9H270 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
VPS11Q9H270 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS11Q9H270 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 RNU1-134P-201ENST00000362935 165 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 SNORA5.1-201ENST00000384275 131 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 RNU6-636P-201ENST00000384598 107 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 RNU6-225P-201ENST00000384613 103 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 AP000357.1-201ENST00000409926 1165 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 FCF1P9-201ENST00000412546 282 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC093422.3-201ENST00000428506 305 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS11Q9H270 MTND5P2-201ENST00000442927 1142 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 MED28P3-201ENST00000444288 531 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC011037.1-201ENST00000483964 558 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS11Q9H270 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS11Q9H270 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 OR11H3P-201ENST00000554547 982 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 MIR3157-201ENST00000578688 85 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 RSL24D1P11-201ENST00000591045 491 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms