Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL022322.2-201ENST00000624072 20397 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 MTCO1P6-201ENST00000481192 1384 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 DDX18P4-201ENST00000511690 1966 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 IGKV7-3-201ENST00000357453 298 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 MIR375-201ENST00000362103 64 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC005042.1-201ENST00000393397 800 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 OR7E156P-201ENST00000400303 464 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC234064.1-201ENST00000436312 247 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AL133244.1-201ENST00000456007 258 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 TRBV8-2-201ENST00000475637 270 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AP000563.1-201ENST00000490865 758 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC092593.2-201ENST00000513866 913 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 HMGB1P42-201ENST00000532126 553 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC125612.1-201ENST00000547580 377 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC063977.5-201ENST00000601044 974 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC002069.2-201ENST00000603580 883 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 BNIP3P4-201ENST00000604946 565 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC092106.3-201ENST00000611308 722 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC024257.5-201ENST00000612739 531 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AL096712.1-201ENST00000614561 159 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 RN7SL544P-201ENST00000617232 284 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 RN7SL763P-201ENST00000620922 284 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AP002967.1-201ENST00000624203 539 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC009039.2-201ENST00000624524 529 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC087565.3-203ENST00000641018 837 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 RBPJP2-201ENST00000618187 1444 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 AC138393.1-206ENST00000540997 1886 ntBASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM54Q9BYV2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC007938.2-201ENST00000604666 2634 ntBASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM54Q9BYV2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms