Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC104109.1-201ENST00000498563 436 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 RN7SKP34-201ENST00000516142 244 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 RNA5SP228-201ENST00000516232 133 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 RNU1-6P-201ENST00000516290 144 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AC125612.1-201ENST00000547580 377 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AC007225.2-201ENST00000562529 256 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 COX6CP4-201ENST00000605798 228 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AP001521.2-201ENST00000608772 546 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AC004808.2-201ENST00000627965 773 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 AC099654.2-201ENST00000433031 1980 ntBASIC4.14□□□□□ -1.75
CPNE2Q96FN4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CPNE2Q96FN4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 RNU1-83P-201ENST00000363426 164 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 SNORA70-201ENST00000384436 135 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 U3.25-201ENST00000391209 220 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AF186996.5-201ENST00000418098 904 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 LINC00993-201ENST00000420453 540 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 PPIAP13-201ENST00000434706 478 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC245047.2-201ENST00000441060 530 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 Z80107.2-201ENST00000445127 392 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 MTND4LP12-201ENST00000448237 295 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC005008.1-201ENST00000456151 612 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 RPL5P30-201ENST00000465511 891 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 RN7SL174P-201ENST00000475578 289 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 RN7SL41P-201ENST00000476144 297 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC079841.1-201ENST00000481228 950 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 RPS4XP1-201ENST00000482189 787 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 HMGB3P13-201ENST00000511263 607 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 PDCD5P1-201ENST00000543528 309 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC087468.1-201ENST00000604365 630 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC026979.4-201ENST00000606555 645 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AL159169.2-201ENST00000610061 1269 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AL121612.2-201ENST00000612261 482 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 EIF3FP1-201ENST00000613970 806 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AL158196.1-201ENST00000616786 434 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 OR8A1-204ENST00000642111 1145 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC091046.3-201ENST00000631455 1574 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 HSPA8P17-201ENST00000427029 1382 ntBASIC4.13□□□□□ -1.75
CPNE2Q96FN4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.13□□□□□ -1.75
CPNE2Q96FN4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE2Q96FN4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE2Q96FN4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE2Q96FN4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE2Q96FN4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE2Q96FN4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPNE2Q96FN4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.12□□□□□ -1.75
CPNE2Q96FN4 RNA5SP28-201ENST00000363841 119 ntBASIC4.12□□□□□ -1.75
CPNE2Q96FN4 RNA5SP435-201ENST00000364044 108 ntBASIC4.12□□□□□ -1.75
CPNE2Q96FN4 RN7SKP15-201ENST00000364742 309 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms