Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC112206.3-201ENST00000514578 389 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC027026.1-201ENST00000532323 742 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 SSU72P6-201ENST00000532644 488 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC018630.1-201ENST00000541376 925 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC034105.3-201ENST00000565294 442 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC023827.2-201ENST00000566880 1061 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC126323.4-201ENST00000566935 234 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC244100.4-201ENST00000617747 388 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 AC012629.3-201ENST00000623397 328 ntBASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LYSMD3Q7Z3D4 NMD3P1-201ENST00000439704 1488 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AP002800.1-201ENST00000624982 2225 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC003985.2-201ENST00000562268 1669 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 Y_RNA.159-201ENST00000363674 87 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 Y_RNA.259-201ENST00000364619 101 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-639P-201ENST00000384074 107 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 RN7SKP62-201ENST00000384539 329 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 RNA5SP53-201ENST00000391299 120 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AL356967.1-201ENST00000406305 431 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 SNORA11C-201ENST00000408532 129 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 CYP4F32P-201ENST00000426492 504 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 SKP1P1-201ENST00000438081 489 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 OR52I1-201ENST00000450052 1050 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 SLAMF6P1-201ENST00000451067 602 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC099563.1-201ENST00000456086 418 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 BX323845.2-201ENST00000458382 234 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 RN7SL518P-201ENST00000491887 280 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC096754.1-201ENST00000508904 818 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC017037.2-201ENST00000513850 890 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 Y_RNA.672-201ENST00000516289 104 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 COX6CP5-201ENST00000527162 228 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 SLC2A13P1-201ENST00000531560 322 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC013828.2-201ENST00000532487 235 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC004817.2-201ENST00000561794 651 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 ULK4P1-202ENST00000565174 503 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC005668.1-201ENST00000571142 476 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 MIR4307-201ENST00000582802 84 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 MIR3149-201ENST00000584629 83 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AC012065.3-201ENST00000602736 439 ntBASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
LYSMD3Q7Z3D4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms