Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MIR6806-201ENST00000622141 64 ntBASIC3.6□□□□□ -1.83
CCL20P78556 AL356121.2-201ENST00000624715 780 ntBASIC3.6□□□□□ -1.83
CCL20P78556 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.6□□□□□ -1.83
CCL20P78556 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 CUL4AP1-201ENST00000514750 1863 ntBASIC3.6□□□□□ -1.83
CCL20P78556 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CCL20P78556 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL20P78556 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCL20P78556 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.59□□□□□ -1.83
CCL20P78556 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCL20P78556 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL20P78556 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
CCL20P78556 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCL20P78556 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
CCL20P78556 SNORA74A-201ENST00000364089 198 ntBASIC3.59□□□□□ -1.83
CCL20P78556 RN7SKP224-201ENST00000364140 325 ntBASIC3.59□□□□□ -1.83
CCL20P78556 RNU1-63P-201ENST00000383902 164 ntBASIC3.59□□□□□ -1.83
CCL20P78556 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCL20P78556 LYPLA1P3-201ENST00000402650 695 ntBASIC3.59□□□□□ -1.83
CCL20P78556 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.59□□□□□ -1.83
CCL20P78556 OR51B3P-201ENST00000412287 913 ntBASIC3.59□□□□□ -1.83
CCL20P78556 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.59□□□□□ -1.83
CCL20P78556 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL20P78556 DDX39BP1-205ENST00000422507 192 ntBASIC3.59□□□□□ -1.83
CCL20P78556 RPL23AP25-201ENST00000430973 463 ntBASIC3.59□□□□□ -1.83
CCL20P78556 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL20P78556 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.59□□□□□ -1.83
CCL20P78556 RPL7L1P1-201ENST00000448259 785 ntBASIC3.59□□□□□ -1.83
CCL20P78556 AC092647.2-201ENST00000452998 253 ntBASIC3.59□□□□□ -1.83
CCL20P78556 AL133477.1-201ENST00000457472 514 ntBASIC3.59□□□□□ -1.83
CCL20P78556 RPL23AP2-201ENST00000471227 466 ntBASIC3.59□□□□□ -1.83
CCL20P78556 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.59□□□□□ -1.83
CCL20P78556 PARP4P3-201ENST00000510265 317 ntBASIC3.59□□□□□ -1.83
CCL20P78556 IGHV3-63-201ENST00000518422 341 ntBASIC3.59□□□□□ -1.83
CCL20P78556 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.59□□□□□ -1.83
CCL20P78556 RAB30-209ENST00000532548 644 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL20P78556 OR7E128P-201ENST00000532736 1024 ntBASIC3.59□□□□□ -1.83
CCL20P78556 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.59□□□□□ -1.83
CCL20P78556 AL121839.1-201ENST00000556233 1185 ntBASIC3.59□□□□□ -1.83
CCL20P78556 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.59□□□□□ -1.83
CCL20P78556 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.59□□□□□ -1.83
CCL20P78556 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL20P78556 AC067773.1-201ENST00000603284 1094 ntBASIC3.59□□□□□ -1.83
CCL20P78556 FO393422.1-201ENST00000603908 708 ntBASIC3.59□□□□□ -1.83
CCL20P78556 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL20P78556 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL20P78556 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCL20P78556 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL20P78556 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCL20P78556 AC107021.2-201ENST00000567714 2095 ntBASIC3.59□□□□□ -1.83
CCL20P78556 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCL20P78556 VN2R3P-201ENST00000422626 1412 ntBASIC3.59□□□□□ -1.84
CCL20P78556 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.59□□□□□ -1.84
CCL20P78556 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCL20P78556 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.59□□□□□ -1.84
CCL20P78556 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCL20P78556 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCL20P78556 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.59□□□□□ -1.84
CCL20P78556 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 AC023490.2-201ENST00000359859 470 ntBASIC3.58□□□□□ -1.84
CCL20P78556 RNA5SP388-201ENST00000362584 119 ntBASIC3.58□□□□□ -1.84
CCL20P78556 RN7SKP275-201ENST00000364626 301 ntBASIC3.58□□□□□ -1.84
CCL20P78556 RN7SKP124-201ENST00000364730 341 ntBASIC3.58□□□□□ -1.84
CCL20P78556 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCL20P78556 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL20P78556 RNU1-82P-201ENST00000390851 165 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL20P78556 PRELID3BP10-201ENST00000431957 584 ntBASIC3.58□□□□□ -1.84
CCL20P78556 HMGB3P10-201ENST00000434734 572 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.58□□□□□ -1.84
CCL20P78556 PTMAP3-201ENST00000447474 330 ntBASIC3.58□□□□□ -1.84
CCL20P78556 HMGB3P22-202ENST00000451823 572 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 HMGN2P25-201ENST00000486956 268 ntBASIC3.58□□□□□ -1.84
CCL20P78556 RN7SL547P-201ENST00000490793 290 ntBASIC3.58□□□□□ -1.84
CCL20P78556 RN7SL244P-201ENST00000493405 297 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AC025164.1-201ENST00000496249 478 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL20P78556 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.58□□□□□ -1.84
CCL20P78556 MRPS33P2-201ENST00000507850 322 ntBASIC3.58□□□□□ -1.84
CCL20P78556 COX6B1P5-201ENST00000509843 249 ntBASIC3.58□□□□□ -1.84
CCL20P78556 AC090281.1-201ENST00000523019 276 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms