Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU1-87P-201ENST00000363727 170 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 Y_RNA.359-201ENST00000365498 102 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
EPHB3P54753 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 Y_RNA.390-201ENST00000383932 102 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 RNU6-114P-201ENST00000384704 105 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 HMGB1P10-201ENST00000395823 563 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 NPM1P38-201ENST00000403835 865 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 RN7SKP151-201ENST00000410230 316 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 RNU2-17P-201ENST00000410290 190 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 MYL6P5-201ENST00000412707 459 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 OR2AT2P-201ENST00000413438 905 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 RPS4XP5-201ENST00000419038 768 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB3P54753 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB3P54753 RAC1P8-201ENST00000427086 527 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 MOB1AP1-201ENST00000430903 535 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB3P54753 VN1R54P-201ENST00000435210 1049 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 SNRPEP8-201ENST00000442866 260 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB3P54753 MTCO1P48-201ENST00000448024 1096 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 EPS15P1-201ENST00000448836 336 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 GTF2IP12-201ENST00000456547 356 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 CFTRP1-201ENST00000456646 183 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 RPL7P32-201ENST00000457119 744 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 RN7SL214P-201ENST00000487317 265 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB3P54753 AL136038.1-201ENST00000497246 351 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 NENFP3-201ENST00000503735 313 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 FABP5P5-201ENST00000515537 406 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 RNU6-319P-201ENST00000516025 108 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 SEPT10P1-201ENST00000517342 1162 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 AC027667.1-201ENST00000545814 304 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.23□□□□□ -1.41
EPHB3P54753 AC022404.1-201ENST00000555320 273 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB3P54753 AC010547.6-201ENST00000571789 193 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB3P54753 SNORD95-201ENST00000579879 68 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB3P54753 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB3P54753 AL137072.1-201ENST00000603444 466 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC145423.1-201ENST00000605712 336 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC091946.2-201ENST00000606105 291 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB3P54753 uc_338.26-201ENST00000612659 160 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 RNA5SP440-201ENST00000612665 119 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC010678.1-201ENST00000614118 713 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AL121873.1-201ENST00000616013 524 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC092794.2-201ENST00000620933 563 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 SAMMSON-209ENST00000641222 1100 ntBASIC6.23□□□□□ -1.41
EPHB3P54753 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB3P54753 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB3P54753 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
EPHB3P54753 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB3P54753 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
EPHB3P54753 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.22□□□□□ -1.41
EPHB3P54753 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
EPHB3P54753 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
EPHB3P54753 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
EPHB3P54753 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
EPHB3P54753 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.22□□□□□ -1.41
EPHB3P54753 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
EPHB3P54753 AC016716.1-201ENST00000265882 708 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
EPHB3P54753 OR4G2P-201ENST00000328113 903 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 AL672167.1-206ENST00000356293 943 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 RNA5SP500-201ENST00000364486 119 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 Y_RNA.813-201ENST00000364639 102 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
EPHB3P54753 RNU6-316P-201ENST00000391027 107 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
EPHB3P54753 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.22□□□□□ -1.41
EPHB3P54753 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.22□□□□□ -1.41
EPHB3P54753 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.22□□□□□ -1.41
EPHB3P54753 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.22□□□□□ -1.41
EPHB3P54753 AC093155.2-201ENST00000420734 937 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.22□□□□□ -1.41
EPHB3P54753 RPS27AP7-201ENST00000422792 455 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 AL121776.1-201ENST00000429337 372 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.22□□□□□ -1.41
EPHB3P54753 AC091862.1-201ENST00000438016 1100 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.22□□□□□ -1.41
EPHB3P54753 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.22□□□□□ -1.41
EPHB3P54753 IGBP1P3-201ENST00000447449 1000 ntBASIC6.22□□□□□ -1.41
EPHB3P54753 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.22□□□□□ -1.41
EPHB3P54753 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms