Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL1P09341 HMGB3P22-202ENST00000451823 572 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 RPS27AP2-201ENST00000457576 465 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL1P09341 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL1P09341 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL1P09341 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL1P09341 AC092349.1-201ENST00000504903 310 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 PARP4P3-201ENST00000510265 317 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL1P09341 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL1P09341 AP006289.1-201ENST00000538089 277 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.6□□□□□ -1.83
CXCL1P09341 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL1P09341 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL1P09341 HMGB2P1-201ENST00000591146 634 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL1P09341 AC008536.1-201ENST00000602872 669 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC095055.1-201ENST00000603472 1113 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 HMGB1P50-201ENST00000605814 607 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC008966.2-201ENST00000606157 453 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC019206.1-201ENST00000621938 425 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL1P09341 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.6□□□□□ -1.83
CXCL1P09341 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL1P09341 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL1P09341 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 AL627171.1-201ENST00000618845 1308 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CXCL1P09341 AL355852.1-201ENST00000454081 1771 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 FAM35DP-201ENST00000323387 2712 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC083899.2-201ENST00000423285 1376 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AC017007.4-201ENST00000503353 1352 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
CXCL1P09341 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL1P09341 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 AC008758.3-201ENST00000507003 1829 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 RN7SKP187-201ENST00000365536 330 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CXCL1P09341 RNU1-77P-201ENST00000390868 162 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AC009804.1-201ENST00000400949 179 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL1P09341 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL1P09341 RPL21P43-201ENST00000425440 472 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL1P09341 AL451139.1-201ENST00000434718 346 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 RPL23AP19-201ENST00000436229 369 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AC012075.1-201ENST00000436549 580 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.59□□□□□ -1.83
CXCL1P09341 IGHV5-78-201ENST00000450948 295 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC010350.1-201ENST00000504908 231 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL1P09341 MTCYBP19-201ENST00000517463 1124 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC018442.3-201ENST00000523025 183 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 OR5M7P-201ENST00000526140 972 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL1P09341 OR10G5P-201ENST00000532733 358 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 UBTFL9-201ENST00000534504 1148 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CXCL1P09341 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL1P09341 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL1P09341 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.59□□□□□ -1.83
CXCL1P09341 AL360157.1-201ENST00000565962 87 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC027243.2-201ENST00000602530 724 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AL139041.1-201ENST00000605480 610 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AC009704.2-201ENST00000618739 483 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AL158062.1-201ENST00000619632 745 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CXCL1P09341 AC011815.3-201ENST00000624194 473 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 AL353662.3-201ENST00000625131 237 ntBASIC3.59□□□□□ -1.83
CXCL1P09341 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL1P09341 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL1P09341 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms