Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC108751.5-201ENST00000492880 1336 ntBASIC4.57□□□□□ -1.68
TNFP01375 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFP01375 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TNFP01375 IGKV7-3-201ENST00000357453 298 ntBASIC4.57□□□□□ -1.68
TNFP01375 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.57□□□□□ -1.68
TNFP01375 AP000580.1-201ENST00000404439 358 ntBASIC4.57□□□□□ -1.68
TNFP01375 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.57□□□□□ -1.68
TNFP01375 RPL18P10-201ENST00000425606 538 ntBASIC4.57□□□□□ -1.68
TNFP01375 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.57□□□□□ -1.68
TNFP01375 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.57□□□□□ -1.68
TNFP01375 RPL36AP41-201ENST00000493820 306 ntBASIC4.57□□□□□ -1.68
TNFP01375 AC007016.1-201ENST00000512110 244 ntBASIC4.57□□□□□ -1.68
TNFP01375 CYCSP40-201ENST00000575927 294 ntBASIC4.57□□□□□ -1.68
TNFP01375 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.57□□□□□ -1.68
TNFP01375 AP005019.3-201ENST00000620418 560 ntBASIC4.57□□□□□ -1.68
TNFP01375 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFP01375 AC139713.2-214ENST00000642059 1811 ntBASIC4.57□□□□□ -1.68
TNFP01375 MFSD8-242ENST00000641690 4199 ntBASIC4.57□□□□□ -1.68
TNFP01375 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TNFP01375 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.57□□□□□ -1.68
TNFP01375 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TNFP01375 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
TNFP01375 MTCO1P15-201ENST00000529569 1526 ntBASIC4.56□□□□□ -1.68
TNFP01375 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TNFP01375 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFP01375 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.56□□□□□ -1.68
TNFP01375 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFP01375 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
TNFP01375 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TNFP01375 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFP01375 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 OR1F12-201ENST00000402365 945 ntBASIC4.56□□□□□ -1.68
TNFP01375 U3.35-201ENST00000408405 208 ntBASIC4.56□□□□□ -1.68
TNFP01375 EIF4HP2-201ENST00000424380 563 ntBASIC4.56□□□□□ -1.68
TNFP01375 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFP01375 TPT1P12-201ENST00000448968 492 ntBASIC4.56□□□□□ -1.68
TNFP01375 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFP01375 MORF4L1P4-201ENST00000450245 976 ntBASIC4.56□□□□□ -1.68
TNFP01375 AC108463.1-201ENST00000450258 347 ntBASIC4.56□□□□□ -1.68
TNFP01375 Z95152.1-201ENST00000453556 656 ntBASIC4.56□□□□□ -1.68
TNFP01375 AC090686.1-201ENST00000481577 749 ntBASIC4.56□□□□□ -1.68
TNFP01375 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFP01375 AC013356.1-201ENST00000489027 564 ntBASIC4.56□□□□□ -1.68
TNFP01375 AC098799.3-201ENST00000506095 438 ntBASIC4.56□□□□□ -1.68
TNFP01375 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFP01375 FTH1P11-201ENST00000517577 551 ntBASIC4.56□□□□□ -1.68
TNFP01375 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFP01375 AC084783.1-201ENST00000565846 910 ntBASIC4.56□□□□□ -1.68
TNFP01375 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 AC005191.1-201ENST00000603950 358 ntBASIC4.56□□□□□ -1.68
TNFP01375 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFP01375 AL356218.2-201ENST00000605264 187 ntBASIC4.56□□□□□ -1.68
TNFP01375 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFP01375 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 AC125257.1-201ENST00000560400 2930 ntBASIC4.56□□□□□ -1.68
TNFP01375 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFP01375 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFP01375 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFP01375 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
TNFP01375 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 AC011755.1-201ENST00000623763 2049 ntBASIC4.55□□□□□ -1.68
TNFP01375 AL359922.3-201ENST00000624779 1670 ntBASIC4.55□□□□□ -1.68
TNFP01375 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TNFP01375 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TNFP01375 RNA5SP447-201ENST00000363749 119 ntBASIC4.55□□□□□ -1.68
TNFP01375 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TNFP01375 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFP01375 OR51B3P-201ENST00000412287 913 ntBASIC4.55□□□□□ -1.68
TNFP01375 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFP01375 RPEP3-201ENST00000425462 676 ntBASIC4.55□□□□□ -1.68
TNFP01375 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFP01375 NDUFA5P1-201ENST00000433858 341 ntBASIC4.55□□□□□ -1.68
TNFP01375 AL161722.1-201ENST00000446972 1032 ntBASIC4.55□□□□□ -1.68
TNFP01375 RPS23P7-201ENST00000466210 444 ntBASIC4.55□□□□□ -1.68
TNFP01375 AC092905.1-201ENST00000467527 949 ntBASIC4.55□□□□□ -1.68
TNFP01375 IGKV2D-10-201ENST00000520194 281 ntBASIC4.55□□□□□ -1.68
TNFP01375 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.55□□□□□ -1.68
TNFP01375 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFP01375 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFP01375 AL035461.2-201ENST00000619201 524 ntBASIC4.55□□□□□ -1.68
TNFP01375 AL359757.1-201ENST00000623176 255 ntBASIC4.55□□□□□ -1.68
TNFP01375 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFP01375 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFP01375 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.55□□□□□ -1.68
TNFP01375 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFP01375 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms