Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF415P1-201ENST00000582279 1166 ntBASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AL160281.1-201ENST00000605307 311 ntBASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AL021997.2-201ENST00000615674 271 ntBASIC4.67□□□□□ -1.66
CHD7Q9P2D1 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AC008549.2-201ENST00000333482 706 ntBASIC4.67□□□□□ -1.66
CHD7Q9P2D1 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 RNA5SP360-201ENST00000516555 118 ntBASIC4.67□□□□□ -1.66
CHD7Q9P2D1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD7Q9P2D1 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 U8.11-201ENST00000384699 133 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 U8.12-201ENST00000384701 133 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 RNA5SP36-201ENST00000410197 133 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 PDSS1P1-201ENST00000422953 1114 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 U8.18-201ENST00000459285 133 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AK4P6-201ENST00000505168 528 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AP001157.1-201ENST00000550837 2339 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AC015912.2-201ENST00000571053 181 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AC079587.1-201ENST00000603846 277 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AL357559.1-201ENST00000622228 274 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AL121950.1-201ENST00000624993 2077 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AC123769.2-201ENST00000624332 5984 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 AL451086.1-201ENST00000605596 223 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 U6.105-201ENST00000637379 88 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 ADAM5-202ENST00000399789 1942 ntBASIC4.66□□□□□ -1.66
CHD7Q9P2D1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHD7Q9P2D1 UBBP2-201ENST00000376781 231 ntBASIC4.65□□□□□ -1.66
CHD7Q9P2D1 COX6B1P7-201ENST00000430845 235 ntBASIC4.65□□□□□ -1.66
CHD7Q9P2D1 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.65□□□□□ -1.66
CHD7Q9P2D1 AC098799.3-201ENST00000506095 438 ntBASIC4.65□□□□□ -1.66
CHD7Q9P2D1 RNA5SP73-201ENST00000516744 108 ntBASIC4.65□□□□□ -1.66
CHD7Q9P2D1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.65□□□□□ -1.66
CHD7Q9P2D1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.65□□□□□ -1.66
CHD7Q9P2D1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.65□□□□□ -1.66
CHD7Q9P2D1 AC012468.1-201ENST00000604888 430 ntBASIC4.65□□□□□ -1.66
CHD7Q9P2D1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CHD7Q9P2D1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.65□□□□□ -1.66
CHD7Q9P2D1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHD7Q9P2D1 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHD7Q9P2D1 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHD7Q9P2D1 RNA5SP513-201ENST00000364648 118 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 ARAFP1-201ENST00000422172 605 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 MTCO1P54-201ENST00000430139 712 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 NOTCH2P1-201ENST00000443481 624 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 KCTD9P2-201ENST00000512203 1013 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 TVP23BP1-201ENST00000557500 617 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AC021422.1-201ENST00000621212 473 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 TRIM51GP-201ENST00000534741 1350 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 ZNF285B-201ENST00000561698 1767 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 HMGN2P31-201ENST00000432430 273 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 OR2BH1P-201ENST00000608850 864 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AC019176.2-201ENST00000611579 315 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AC084757.4-201ENST00000616350 526 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 uc_338.13-201ENST00000618243 179 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 AL596275.2-208ENST00000641192 594 ntBASIC4.65□□□□□ -1.67
CHD7Q9P2D1 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD7Q9P2D1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.64□□□□□ -1.67
CHD7Q9P2D1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms