Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHOX2BQ99453 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 SND1-IT1-201ENST00000623342 2481 ntBASIC7.67□□□□□ -1.18
PHOX2BQ99453 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.67□□□□□ -1.18
PHOX2BQ99453 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 MAPK10-377ENST00000642006 2752 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 RN7SKP23-201ENST00000625159 4301 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 STAG3L4-201ENST00000352103 530 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 Y_RNA.28-201ENST00000362554 111 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 Y_RNA.187-201ENST00000363918 113 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 SNORD116-29-201ENST00000384516 83 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 MIR1302-3-201ENST00000408128 138 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 FTLP17-201ENST00000432567 525 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AL450996.1-201ENST00000445574 1202 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 AL035551.1-201ENST00000446931 348 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 MTND3P16-201ENST00000452205 344 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 MTCO3P2-201ENST00000457365 171 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC012181.1-201ENST00000479895 423 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 RN7SL868P-201ENST00000485915 303 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 COX6B1P2-201ENST00000489624 230 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 RN7SL518P-201ENST00000491887 280 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 RN7SL143P-201ENST00000496780 297 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 OR4D12P-201ENST00000509361 911 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 TRIM51DP-201ENST00000529746 596 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC063950.1-201ENST00000552036 308 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC010287.1-201ENST00000566916 357 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 RNU6-89P-201ENST00000606519 100 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC004908.1-201ENST00000606572 541 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC243830.2-201ENST00000618067 630 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC079597.1-201ENST00000624306 508 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 U6.101-201ENST00000637707 76 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 MAPK10-281ENST00000641170 3070 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AL355974.1-201ENST00000618896 1708 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC092125.1-201ENST00000562568 1995 ntBASIC7.66□□□□□ -1.18
PHOX2BQ99453 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.66□□□□□ -1.18
PHOX2BQ99453 AL359922.2-201ENST00000581788 3017 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PHOX2BQ99453 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PHOX2BQ99453 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PHOX2BQ99453 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 RNA5SP232-201ENST00000364144 119 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 RNU6-853P-201ENST00000364306 107 ntBASIC7.65□□□□□ -1.18
PHOX2BQ99453 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.65□□□□□ -1.18
PHOX2BQ99453 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PHOX2BQ99453 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms