Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL21A1Q96P44 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL21A1Q96P44 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC092435.4-201ENST00000623012 4159 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 UGT2B26P-201ENST00000508672 1613 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC008549.2-201ENST00000333482 706 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 RN7SKP95-201ENST00000362860 303 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 FABP7P1-201ENST00000424004 391 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 ARL4AP3-201ENST00000441452 574 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 RPS6P2-201ENST00000454208 705 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC090142.2-201ENST00000483263 416 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AL353600.1-201ENST00000608148 251 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 AP001521.2-201ENST00000608772 546 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 OR7M1P-201ENST00000608946 533 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC073575.2-201ENST00000614212 627 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC090510.2-201ENST00000617465 629 ntBASIC4.55□□□□□ -1.68
COL21A1Q96P44 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL21A1Q96P44 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.55□□□□□ -1.68
COL21A1Q96P44 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC099654.2-201ENST00000433031 1980 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC233968.1-201ENST00000611212 1300 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL21A1Q96P44 RN7SKP104-201ENST00000362605 328 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 BMS1P3-201ENST00000372011 932 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AL357515.1-201ENST00000402967 542 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 E2F6P2-201ENST00000420708 748 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 RPL7P11-201ENST00000437586 658 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 OTX2P1-201ENST00000450956 354 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC239798.3-201ENST00000454459 408 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC116562.1-201ENST00000485355 781 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 RPL32P9-201ENST00000487963 407 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 MRPS33P2-201ENST00000507850 322 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC110775.1-201ENST00000513721 462 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 OR5AZ1P-201ENST00000527448 943 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC005000.1-201ENST00000536192 288 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 EDDM3DP-201ENST00000554692 434 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC087477.6-201ENST00000559595 843 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 VN1R81P-201ENST00000602085 372 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.54□□□□□ -1.68
COL21A1Q96P44 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.54□□□□□ -1.68
COL21A1Q96P44 AC243960.7-201ENST00000623532 707 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms