Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 SNORA48.4-201ENST00000391089 134 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 RN7SKP59-201ENST00000410520 314 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC010385.1-201ENST00000412374 256 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 NPM1P4-201ENST00000414095 812 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 HSPD1P12-201ENST00000429127 1069 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC105399.1-202ENST00000447303 205 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 RPL31P44-201ENST00000447680 377 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 MYO5BP2-201ENST00000449815 1277 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 MTND5P8-201ENST00000449817 1083 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 MTND2P8-201ENST00000450555 1025 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC063949.1-201ENST00000552900 865 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC027176.2-201ENST00000559166 746 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 CBX3P2-202ENST00000583365 535 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC233280.2-201ENST00000603917 1070 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AL355802.4-201ENST00000607635 548 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AP000864.1-201ENST00000609424 650 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 MIR6826-201ENST00000617808 98 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC005840.5-201ENST00000619166 599 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 CFTRP2-201ENST00000634304 199 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC079097.1-201ENST00000512187 1399 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
VMP1Q96GC9 GTF2H2B-203ENST00000508065 1432 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 AC006042.3-201ENST00000454684 1469 ntBASIC5.12□□□□□ -1.59
VMP1Q96GC9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VMP1Q96GC9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 RNF6P1-201ENST00000444889 1784 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC015813.6-201ENST00000624409 5808 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC114947.2-201ENST00000565748 2125 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC068870.1-201ENST00000563737 2455 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 RN7SKP162-201ENST00000363605 345 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC009804.1-201ENST00000400949 179 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 OR1F12-201ENST00000402365 945 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 GABARAPL3-201ENST00000412799 354 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 RPL7P56-201ENST00000429441 717 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 ZNF965P-201ENST00000432501 817 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 RPL7P45-201ENST00000455851 743 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 OR2AO1P-201ENST00000476497 403 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 SYT14P1-201ENST00000481459 721 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 RN7SL727P-201ENST00000482164 296 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC011037.1-201ENST00000483964 558 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 RN7SL447P-201ENST00000494711 245 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 RN7SKP141-201ENST00000516167 338 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 SCARNA16.4-201ENST00000516956 187 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AP002812.4-201ENST00000532139 286 ntBASIC5.11□□□□□ -1.59
VMP1Q96GC9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.11□□□□□ -1.59
VMP1Q96GC9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms