Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS13CQ709C8 AL136231.1-201ENST00000429407 730 ntBASIC3.65□□□□□ -1.83
VPS13CQ709C8 AL050321.1-201ENST00000432363 400 ntBASIC3.65□□□□□ -1.83
VPS13CQ709C8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS13CQ709C8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS13CQ709C8 AL132838.2-201ENST00000492041 314 ntBASIC3.65□□□□□ -1.83
VPS13CQ709C8 AL391261.4-201ENST00000616012 481 ntBASIC3.65□□□□□ -1.83
VPS13CQ709C8 MIR6891-201ENST00000618788 93 ntBASIC3.65□□□□□ -1.83
VPS13CQ709C8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
VPS13CQ709C8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS13CQ709C8 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS13CQ709C8 AC022893.2-201ENST00000564832 3296 ntBASIC3.65□□□□□ -1.83
VPS13CQ709C8 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
VPS13CQ709C8 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VPS13CQ709C8 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS13CQ709C8 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AP000542.2-201ENST00000623199 6179 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 U8.11-201ENST00000384699 133 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 U8.12-201ENST00000384701 133 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 MIR183-201ENST00000384958 110 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 RPL23AP38-201ENST00000423801 469 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 NANOGP10-201ENST00000453325 895 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 U8.18-201ENST00000459285 133 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 AC093591.2-201ENST00000565254 3843 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AL121950.1-201ENST00000624993 2077 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 RNA5SP307-201ENST00000362863 116 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 RPL21P43-201ENST00000425440 472 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 AC007967.1-201ENST00000455422 1159 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 RN7SL132P-201ENST00000478131 296 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 HSPD1P15-201ENST00000505573 1122 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AC112230.1-201ENST00000604342 547 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AL603750.1-201ENST00000624216 1717 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 LARP1BP1-201ENST00000506036 1359 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 RNA5SP432-201ENST00000362480 116 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 TPT1P2-201ENST00000413105 503 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 NPM1P34-201ENST00000428821 893 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 RN7SL293P-201ENST00000481765 281 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AL442067.2-201ENST00000614033 363 ntBASIC3.64□□□□□ -1.83
VPS13CQ709C8 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VPS13CQ709C8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS13CQ709C8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 MFSD13B-201ENST00000420133 1290 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AL133547.1-201ENST00000448546 220 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AL161729.3-201ENST00000603533 673 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC093388.1-201ENST00000609166 430 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 AC019176.2-201ENST00000611579 315 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 AL357559.1-201ENST00000622228 274 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 AL592182.3-201ENST00000642132 3304 ntBASIC3.63□□□□□ -1.83
VPS13CQ709C8 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS13CQ709C8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS13CQ709C8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms