Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.09□□□□□ -1.11
SMARCA4P51532 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC8.09□□□□□ -1.11
SMARCA4P51532 AL356276.2-201ENST00000435919 558 ntBASIC8.09□□□□□ -1.11
SMARCA4P51532 AC105031.1-201ENST00000518550 476 ntBASIC8.09□□□□□ -1.11
SMARCA4P51532 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC8.09□□□□□ -1.11
SMARCA4P51532 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC8.09□□□□□ -1.11
SMARCA4P51532 AP001804.2-201ENST00000533932 910 ntBASIC8.09□□□□□ -1.11
SMARCA4P51532 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC8.09□□□□□ -1.11
SMARCA4P51532 AP005901.4-201ENST00000577336 569 ntBASIC8.09□□□□□ -1.11
SMARCA4P51532 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC8.09□□□□□ -1.11
SMARCA4P51532 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SMARCA4P51532 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
SMARCA4P51532 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC8.09□□□□□ -1.11
SMARCA4P51532 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
SMARCA4P51532 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 RNA5SP387-201ENST00000364226 106 ntBASIC8.08□□□□□ -1.12
SMARCA4P51532 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC8.08□□□□□ -1.12
SMARCA4P51532 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC8.08□□□□□ -1.12
SMARCA4P51532 MEG8-217ENST00000556637 924 ntTSL 5 BASIC8.08□□□□□ -1.12
SMARCA4P51532 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC8.08□□□□□ -1.12
SMARCA4P51532 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC8.08□□□□□ -1.12
SMARCA4P51532 CYCSP40-201ENST00000575927 294 ntBASIC8.08□□□□□ -1.12
SMARCA4P51532 AL354984.3-201ENST00000604803 325 ntBASIC8.08□□□□□ -1.12
SMARCA4P51532 AL352984.2-202ENST00000613699 155 ntBASIC8.08□□□□□ -1.12
SMARCA4P51532 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC8.08□□□□□ -1.12
SMARCA4P51532 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SMARCA4P51532 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 SNORA71.3-201ENST00000362582 128 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 CCL7-202ENST00000394627 696 ntTSL 3 BASIC8.07□□□□□ -1.12
SMARCA4P51532 RPS3AP25-201ENST00000411660 793 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 RN7SL132P-201ENST00000478131 296 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 AL133372.1-201ENST00000493565 745 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC8.07□□□□□ -1.12
SMARCA4P51532 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC8.07□□□□□ -1.12
SMARCA4P51532 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
SMARCA4P51532 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC8.07□□□□□ -1.12
SMARCA4P51532 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SMARCA4P51532 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 BMPR1APS1-201ENST00000403332 1598 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 SCARNA15-201ENST00000607520 4325 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC8.07□□□□□ -1.12
SMARCA4P51532 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
SMARCA4P51532 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
SMARCA4P51532 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SMARCA4P51532 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC8.07□□□□□ -1.12
SMARCA4P51532 AC021660.1-201ENST00000465006 554 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC8.07□□□□□ -1.12
SMARCA4P51532 AC006349.1-201ENST00000555526 235 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC8.07□□□□□ -1.12
SMARCA4P51532 AL034408.1-201ENST00000637712 664 ntBASIC8.07□□□□□ -1.12
SMARCA4P51532 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SMARCA4P51532 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC8.06□□□□□ -1.12
SMARCA4P51532 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
SMARCA4P51532 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 ATP5F1P3-201ENST00000397213 657 ntBASIC8.06□□□□□ -1.12
SMARCA4P51532 AC007738.1-201ENST00000413892 348 ntBASIC8.06□□□□□ -1.12
SMARCA4P51532 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC8.06□□□□□ -1.12
SMARCA4P51532 VN1R34P-201ENST00000447387 883 ntBASIC8.06□□□□□ -1.12
SMARCA4P51532 RHEBP2-201ENST00000450289 600 ntBASIC8.06□□□□□ -1.12
SMARCA4P51532 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC8.06□□□□□ -1.12
SMARCA4P51532 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
SMARCA4P51532 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.06□□□□□ -1.12
SMARCA4P51532 AL356863.1-201ENST00000623378 1080 ntBASIC8.06□□□□□ -1.12
SMARCA4P51532 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC8.06□□□□□ -1.12
SMARCA4P51532 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC8.06□□□□□ -1.12
SMARCA4P51532 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SMARCA4P51532 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SMARCA4P51532 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SMARCA4P51532 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SMARCA4P51532 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SMARCA4P51532 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SMARCA4P51532 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC8.05□□□□□ -1.12
SMARCA4P51532 RNU6-628P-201ENST00000410675 107 ntBASIC8.05□□□□□ -1.12
SMARCA4P51532 AC013429.2-201ENST00000418798 781 ntBASIC8.05□□□□□ -1.12
SMARCA4P51532 ANAPC1P1-201ENST00000426186 2145 ntBASIC8.05□□□□□ -1.12
SMARCA4P51532 AL117339.2-201ENST00000430475 180 ntBASIC8.05□□□□□ -1.12
SMARCA4P51532 CYCSP24-201ENST00000445119 316 ntBASIC8.05□□□□□ -1.12
SMARCA4P51532 AC104651.2-201ENST00000447549 528 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms