Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGCLP35914 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGCLP35914 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGCLP35914 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
HMGCLP35914 AC009117.1-201ENST00000563948 554 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 OR1F2P-201ENST00000570470 933 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 CYCSP40-201ENST00000575927 294 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 AC022726.1-201ENST00000587475 207 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 AC245128.3-201ENST00000594721 748 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 AC012414.7-202ENST00000622705 1090 ntBASIC4.83□□□□□ -1.64
HMGCLP35914 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGCLP35914 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGCLP35914 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGCLP35914 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMGCLP35914 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGCLP35914 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGCLP35914 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMGCLP35914 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HMGCLP35914 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
HMGCLP35914 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
HMGCLP35914 SNORA58B-201ENST00000364259 136 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 SNORA68.2-201ENST00000391263 128 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCLP35914 AC006455.6-201ENST00000426192 893 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 RPL12P3-201ENST00000440080 396 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 SNRPFP2-201ENST00000440710 251 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 AC073648.4-201ENST00000442655 781 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 RPS5P7-201ENST00000456664 608 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCLP35914 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCLP35914 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCLP35914 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCLP35914 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGCLP35914 RN7SL802P-201ENST00000577858 299 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGCLP35914 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGCLP35914 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 SMG1P4-204ENST00000523028 4131 ntBASIC4.82□□□□□ -1.64
HMGCLP35914 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HMGCLP35914 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCLP35914 NCLP2-201ENST00000416078 1462 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCLP35914 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCLP35914 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCLP35914 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCLP35914 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCLP35914 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCLP35914 AL022393.1-201ENST00000625142 1677 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCLP35914 AC008549.2-201ENST00000333482 706 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCLP35914 U3.30-201ENST00000391308 210 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 U3.35-201ENST00000408405 208 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AL356968.2-201ENST00000412769 1257 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 RGS17P1-201ENST00000423358 553 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AL645608.4-201ENST00000423619 154 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 EIF4HP2-201ENST00000424380 563 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 CKS1BP6-201ENST00000424932 240 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 PA2G4P6-201ENST00000438325 1197 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGCLP35914 RPS3AP41-201ENST00000462701 778 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 RN7SL826P-201ENST00000479724 288 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCLP35914 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGCLP35914 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGCLP35914 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGCLP35914 RNA5SP464-201ENST00000516251 108 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGCLP35914 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCLP35914 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGCLP35914 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCLP35914 BRD9P1-201ENST00000529855 560 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 OR5D15P-201ENST00000531671 942 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCLP35914 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCLP35914 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms