Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.48□□□□□ -1.53
CD40P25942 AC008687.2-201ENST00000597865 520 ntBASIC5.48□□□□□ -1.53
CD40P25942 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 AC095055.1-201ENST00000603472 1113 ntBASIC5.48□□□□□ -1.53
CD40P25942 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 AC100793.4-201ENST00000613683 429 ntBASIC5.48□□□□□ -1.53
CD40P25942 AC018755.4-201ENST00000619715 454 ntBASIC5.48□□□□□ -1.53
CD40P25942 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 AL591848.4-201ENST00000567832 3472 ntBASIC5.48□□□□□ -1.53
CD40P25942 AL606537.1-201ENST00000607258 2011 ntBASIC5.48□□□□□ -1.53
CD40P25942 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.48□□□□□ -1.53
CD40P25942 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 AC027514.1-201ENST00000588561 1603 ntBASIC5.48□□□□□ -1.53
CD40P25942 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 AC104162.1-201ENST00000430831 2382 ntBASIC5.48□□□□□ -1.53
CD40P25942 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD40P25942 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.48□□□□□ -1.53
CD40P25942 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.47□□□□□ -1.53
CD40P25942 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.47□□□□□ -1.53
CD40P25942 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CD40P25942 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 AC016716.1-201ENST00000265882 708 ntBASIC5.47□□□□□ -1.53
CD40P25942 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CD40P25942 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CD40P25942 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 RNU6-1122P-201ENST00000384449 107 ntBASIC5.47□□□□□ -1.53
CD40P25942 RN7SKP144-201ENST00000411108 279 ntBASIC5.47□□□□□ -1.53
CD40P25942 CDK8P2-201ENST00000415020 547 ntBASIC5.47□□□□□ -1.53
CD40P25942 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.47□□□□□ -1.53
CD40P25942 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AC011742.2-201ENST00000443818 352 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.47□□□□□ -1.53
CD40P25942 NPM1P39-201ENST00000449818 867 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 RPL21P71-201ENST00000465598 459 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.47□□□□□ -1.53
CD40P25942 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AP002884.1-201ENST00000479691 655 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC092824.1-201ENST00000483524 576 ntBASIC5.47□□□□□ -1.53
CD40P25942 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 NPM1P27-201ENST00000502784 830 ntBASIC5.47□□□□□ -1.53
CD40P25942 SNX5P1-201ENST00000505757 1041 ntBASIC5.47□□□□□ -1.53
CD40P25942 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC010343.2-201ENST00000510162 224 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC008802.1-201ENST00000519121 791 ntBASIC5.47□□□□□ -1.53
CD40P25942 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.47□□□□□ -1.53
CD40P25942 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.47□□□□□ -1.53
CD40P25942 OR6C7P-201ENST00000547875 934 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 GTF2IP22-201ENST00000554443 182 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.47□□□□□ -1.53
CD40P25942 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 AC016839.1-201ENST00000578162 867 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.47□□□□□ -1.53
CD40P25942 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 AC087683.1-201ENST00000591187 441 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.47□□□□□ -1.53
CD40P25942 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 MIR7159-201ENST00000620587 66 ntBASIC5.47□□□□□ -1.53
CD40P25942 AC079228.1-201ENST00000624774 1049 ntBASIC5.47□□□□□ -1.53
CD40P25942 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.47□□□□□ -1.53
CD40P25942 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CD40P25942 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms