Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-760P-201ENST00000516078 97 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC211433.2-201ENST00000608433 387 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC016769.4-201ENST00000616893 535 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 uc_338.9-201ENST00000617424 182 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 MIR6719-201ENST00000622428 87 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC018445.2-201ENST00000622987 260 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AC109780.1-201ENST00000451768 1344 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 AL603750.1-201ENST00000624216 1717 ntBASIC5.11□□□□□ -1.59
HLA-DPA1P20036 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPA1P20036 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AC063976.2-201ENST00000425667 3556 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 RNA5SP507-201ENST00000363603 121 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AC083799.1-201ENST00000366451 910 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 SNORA77-201ENST00000408716 125 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 RNA5SP498-201ENST00000411342 120 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AC005033.1-201ENST00000428904 813 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 BX323845.1-201ENST00000432417 179 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 RPS29P9-201ENST00000440360 171 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 TCEA1P3-201ENST00000443005 880 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 MRPL35P2-201ENST00000448009 511 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 NPM1P29-201ENST00000483112 803 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AC093763.2-201ENST00000505334 1223 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 OR5M14P-201ENST00000506803 618 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AC008083.2-201ENST00000546707 476 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AL359219.2-201ENST00000555184 348 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AC044860.2-201ENST00000561005 179 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AP000473.2-201ENST00000602659 1537 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AL133247.2-201ENST00000603236 482 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AL139407.1-201ENST00000613826 1175 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 TCP11X1-202ENST00000622971 1372 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 AL139254.3-201ENST00000641097 674 ntBASIC5.1□□□□□ -1.59
HLA-DPA1P20036 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPA1P20036 THAP12P4-201ENST00000528321 2266 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC004817.4-201ENST00000602396 3625 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 SNURFL-201ENST00000309296 343 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 SNORA70-201ENST00000384436 135 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 MIR92A2-201ENST00000385299 75 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 RPS20P1-201ENST00000434853 354 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 TXNP5-201ENST00000441043 315 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 NDUFA5P8-201ENST00000449019 346 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC090543.1-201ENST00000492168 485 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC073073.1-201ENST00000493920 463 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC005912.1-201ENST00000495392 255 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 HMGB1P3-201ENST00000502802 616 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC010350.1-201ENST00000504908 231 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC147055.3-201ENST00000510547 851 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC105031.1-201ENST00000518550 476 ntBASIC5.09□□□□□ -1.59
HLA-DPA1P20036 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DPA1P20036 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms