Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 AL121768.1-201ENST00000613917 2544 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFAP04085 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 HSPA8P17-201ENST00000427029 1382 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AC138915.3-201ENST00000562908 1389 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFAP04085 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFAP04085 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 OR11H5P-202ENST00000641612 1325 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFAP04085 CDC27P2-201ENST00000425026 1922 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 U8.3-201ENST00000363321 132 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 RNU6-483P-201ENST00000384088 108 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 Y_RNA.509-201ENST00000384506 99 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 RNA5SP176-201ENST00000390956 110 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 SNORD115.1-201ENST00000391109 76 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 RN7SKP91-201ENST00000410852 288 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 RPS20P15-201ENST00000412792 311 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 RPSAP60-201ENST00000415403 880 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 ISCA1P6-201ENST00000427740 390 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 FDX1P2-201ENST00000450769 375 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 C1DP4-201ENST00000455429 424 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 PMCHL2-203ENST00000457791 237 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 RPS29P25-201ENST00000481709 171 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 NDUFA5P12-201ENST00000503796 343 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AC114324.2-202ENST00000503812 134 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.59□□□□□ -1.35
PDGFAP04085 OR5M6P-201ENST00000530227 937 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.59□□□□□ -1.35
PDGFAP04085 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.59□□□□□ -1.35
PDGFAP04085 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFAP04085 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.59□□□□□ -1.35
PDGFAP04085 AL845331.3-202ENST00000562856 261 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.59□□□□□ -1.35
PDGFAP04085 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
PDGFAP04085 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.59□□□□□ -1.35
PDGFAP04085 AC010338.1-201ENST00000621823 717 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AC129778.1-202ENST00000623812 261 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AL683826.1-201ENST00000624104 627 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AC006065.6-201ENST00000625201 545 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AL591379.1-207ENST00000635982 261 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFAP04085 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFAP04085 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PDGFAP04085 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFAP04085 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.59□□□□□ -1.35
PDGFAP04085 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PDGFAP04085 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.59□□□□□ -1.36
PDGFAP04085 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.36
PDGFAP04085 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
PDGFAP04085 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
PDGFAP04085 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
PDGFAP04085 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PDGFAP04085 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFAP04085 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PDGFAP04085 PPBPP2-201ENST00000513150 1362 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.58□□□□□ -1.36
PDGFAP04085 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFAP04085 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PDGFAP04085 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PDGFAP04085 RNA5SP472-201ENST00000363868 119 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 RN7SKP187-201ENST00000365536 330 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PDGFAP04085 RNU6-657P-201ENST00000383904 107 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 SNORD94-201ENST00000386037 137 ntBASIC6.58□□□□□ -1.36
PDGFAP04085 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PDGFAP04085 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFAP04085 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFAP04085 AC234782.4-201ENST00000417646 1048 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms