Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 HMGB1P47-201ENST00000511281 589 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 ENPP7P9-201ENST00000514456 627 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 RN7SKP157-201ENST00000516174 282 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 RNU6-889P-201ENST00000517189 103 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 MTND5P21-201ENST00000531961 522 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.82□□□□□ -1.64
CLPTM1O96005 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.82□□□□□ -1.64
CLPTM1O96005 SNORD39.2-201ENST00000579995 76 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 RN7SL356P-201ENST00000582228 248 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AP003117.1-201ENST00000602771 554 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 AC104695.2-201ENST00000605056 775 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AL691477.1-201ENST00000624398 162 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.82□□□□□ -1.64
CLPTM1O96005 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CLPTM1O96005 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.82□□□□□ -1.64
CLPTM1O96005 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.81□□□□□ -1.64
CLPTM1O96005 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLPTM1O96005 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLPTM1O96005 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLPTM1O96005 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLPTM1O96005 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 SNORD51.1-201ENST00000365405 77 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 GCNT6-201ENST00000379591 934 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC104297.1-201ENST00000393779 870 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 AL035079.1-201ENST00000405210 287 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 RNA5SP146-201ENST00000410743 123 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 EIF4A1P3-201ENST00000411521 244 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
CLPTM1O96005 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.81□□□□□ -1.64
CLPTM1O96005 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.81□□□□□ -1.64
CLPTM1O96005 ARL5AP3-201ENST00000439327 386 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 RNF2P1-201ENST00000442955 1010 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.81□□□□□ -1.64
CLPTM1O96005 RPL10P17-201ENST00000453852 316 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 LDHBP2-201ENST00000456969 1005 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC092754.1-201ENST00000472975 479 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.81□□□□□ -1.64
CLPTM1O96005 DEFB109F-201ENST00000491870 277 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AC093763.2-201ENST00000505334 1223 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC106872.4-201ENST00000510050 523 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 FABP5P6-201ENST00000510588 409 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AC008147.3-201ENST00000548666 354 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.81□□□□□ -1.64
CLPTM1O96005 RBM22P12-201ENST00000567098 1255 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AC015911.5-201ENST00000587076 451 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.81□□□□□ -1.64
CLPTM1O96005 MIMT1-201ENST00000597105 1050 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 BNIP3P31-201ENST00000604515 566 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC022306.3-201ENST00000619930 550 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AC015908.5-201ENST00000623289 343 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC007683.2-201ENST00000624681 714 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.81□□□□□ -1.64
CLPTM1O96005 AL355480.1-201ENST00000629041 99 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 MIR4302-201ENST00000638058 60 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLPTM1O96005 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLPTM1O96005 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
CLPTM1O96005 VPS35P1-201ENST00000563400 1518 ntBASIC4.81□□□□□ -1.64
CLPTM1O96005 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLPTM1O96005 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLPTM1O96005 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC009501.3-201ENST00000605001 1352 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 OR10AB1P-202ENST00000641219 1686 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLPTM1O96005 AC108751.5-201ENST00000492880 1336 ntBASIC4.8□□□□□ -1.64
CLPTM1O96005 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms