Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SNORA62.2-201ENST00000364672 152 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNOT4O95628 RNA5SP198-201ENST00000410376 127 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 RPL21P43-201ENST00000425440 472 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AC099782.1-201ENST00000425889 474 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 MTCO2P19-201ENST00000427513 598 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CNOT4O95628 AC069154.1-201ENST00000432914 542 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AL596276.1-201ENST00000434465 418 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.7□□□□□ -1.5
CNOT4O95628 AL121601.2-201ENST00000438019 707 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 RPL21P134-201ENST00000453468 483 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 ZNF114P1-201ENST00000453500 292 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 RPL7AP52-201ENST00000458096 790 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 RN7SL643P-201ENST00000471845 291 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AC126182.1-201ENST00000478134 357 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 RN7SL809P-201ENST00000482040 297 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.7□□□□□ -1.5
CNOT4O95628 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.7□□□□□ -1.5
CNOT4O95628 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.7□□□□□ -1.5
CNOT4O95628 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 AC091874.2-201ENST00000505889 720 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNOT4O95628 PGBD4P4-201ENST00000509673 613 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 KHDC1P1-201ENST00000511053 508 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 RNA5SP441-201ENST00000516809 88 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 RNU6-678P-201ENST00000516832 109 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.7□□□□□ -1.5
CNOT4O95628 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.7□□□□□ -1.5
CNOT4O95628 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.7□□□□□ -1.5
CNOT4O95628 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.7□□□□□ -1.5
CNOT4O95628 MIR4502-201ENST00000580432 81 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 ELOCP28-201ENST00000590044 317 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.7□□□□□ -1.5
CNOT4O95628 Z99129.1-201ENST00000612510 255 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 MIR6862-1-201ENST00000613016 70 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 MIR6862-2-201ENST00000614755 70 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 uc_338.9-201ENST00000617424 182 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 AL122023.1-201ENST00000622847 530 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 LINC01808-202ENST00000641680 1116 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNOT4O95628 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.7□□□□□ -1.5
CNOT4O95628 AC232271.1-201ENST00000602455 2715 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNOT4O95628 AC006484.1-201ENST00000435086 1884 ntBASIC5.7□□□□□ -1.5
CNOT4O95628 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNOT4O95628 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNOT4O95628 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CNOT4O95628 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNOT4O95628 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNOT4O95628 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CNOT4O95628 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CNOT4O95628 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 CR848007.1-201ENST00000442354 1699 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 IL6STP1-201ENST00000346911 1020 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 RNA5SP27-201ENST00000363839 119 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AC136624.1-201ENST00000400791 413 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AL139805.1-201ENST00000407837 289 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 SNORA11B-201ENST00000408175 129 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNOT4O95628 AP000357.1-201ENST00000409926 1165 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.69□□□□□ -1.5
CNOT4O95628 VN1R20P-201ENST00000425215 966 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 MED14P1-201ENST00000430517 648 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 GAPDHP59-201ENST00000435908 267 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 AL353093.1-201ENST00000441292 436 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 RPL31P44-201ENST00000447680 377 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 RN7SL552P-201ENST00000462094 276 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 RN7SL39P-201ENST00000462264 297 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 CCDC75P1-201ENST00000469247 791 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC138853.1-201ENST00000503549 823 ntBASIC5.69□□□□□ -1.5
CNOT4O95628 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.69□□□□□ -1.5
CNOT4O95628 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.69□□□□□ -1.5
CNOT4O95628 RNU6-405P-201ENST00000516637 110 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms