Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USH2AO75445 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 MIR128-1-201ENST00000384921 82 ntBASIC2.01□□□□□ -2.09
USH2AO75445 NDUFA5P1-201ENST00000433858 341 ntBASIC2.01□□□□□ -2.09
USH2AO75445 CREM-220ENST00000463314 964 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 AC017015.1-201ENST00000477387 286 ntBASIC2.01□□□□□ -2.09
USH2AO75445 AC006499.5-201ENST00000505037 514 ntBASIC2.01□□□□□ -2.09
USH2AO75445 AC118465.1-201ENST00000513820 1271 ntBASIC2.01□□□□□ -2.09
USH2AO75445 RNA5SP360-201ENST00000516555 118 ntBASIC2.01□□□□□ -2.09
USH2AO75445 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 YPEL5P2-201ENST00000605553 359 ntBASIC2.01□□□□□ -2.09
USH2AO75445 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 AC055839.1-201ENST00000634467 498 ntBASIC2.01□□□□□ -2.09
USH2AO75445 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 AL365361.1-201ENST00000566942 3481 ntBASIC2.01□□□□□ -2.09
USH2AO75445 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USH2AO75445 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 OOSP1P1-201ENST00000423265 274 ntBASIC2.01□□□□□ -2.09
USH2AO75445 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC2.01□□□□□ -2.09
USH2AO75445 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 AC005255.1-201ENST00000593748 216 ntBASIC2.01□□□□□ -2.09
USH2AO75445 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC2.01□□□□□ -2.09
USH2AO75445 AL031985.2-201ENST00000600955 480 ntBASIC2.01□□□□□ -2.09
USH2AO75445 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USH2AO75445 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
USH2AO75445 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC2.01□□□□□ -2.09
USH2AO75445 AC093671.1-201ENST00000624981 2929 ntBASIC2.01□□□□□ -2.09
USH2AO75445 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 AC009643.2-201ENST00000603543 1448 ntBASIC2□□□□□ -2.09
USH2AO75445 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 ARHGAP42P1-201ENST00000507474 1976 ntBASIC2□□□□□ -2.09
USH2AO75445 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
USH2AO75445 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 RPL21P17-201ENST00000397467 475 ntBASIC2□□□□□ -2.09
USH2AO75445 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC2□□□□□ -2.09
USH2AO75445 RPS4XP15-201ENST00000489210 795 ntBASIC2□□□□□ -2.09
USH2AO75445 MIR4286-201ENST00000580651 93 ntBASIC2□□□□□ -2.09
USH2AO75445 MIR4325-201ENST00000583049 90 ntBASIC2□□□□□ -2.09
USH2AO75445 CYCSP1-201ENST00000604815 315 ntBASIC2□□□□□ -2.09
USH2AO75445 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2□□□□□ -2.09
USH2AO75445 AL445363.3-201ENST00000623080 671 ntBASIC2□□□□□ -2.09
USH2AO75445 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC2□□□□□ -2.09
USH2AO75445 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC2□□□□□ -2.09
USH2AO75445 NFASC-201ENST00000339876 10333 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC2□□□□□ -2.09
USH2AO75445 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC2□□□□□ -2.09
USH2AO75445 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC2□□□□□ -2.09
USH2AO75445 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
USH2AO75445 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
USH2AO75445 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2□□□□□ -2.09
USH2AO75445 AC073342.2-201ENST00000595842 1800 ntBASIC2□□□□□ -2.09
USH2AO75445 AL442128.2-201ENST00000620246 1824 ntBASIC2□□□□□ -2.09
USH2AO75445 RN7SKP153-201ENST00000365026 316 ntBASIC2□□□□□ -2.09
USH2AO75445 EIF4A1P3-201ENST00000411521 244 ntBASIC2□□□□□ -2.09
USH2AO75445 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC2□□□□□ -2.09
USH2AO75445 OR8F1P-201ENST00000425243 930 ntBASIC2□□□□□ -2.09
USH2AO75445 PTP4A1P3-201ENST00000433661 420 ntBASIC2□□□□□ -2.09
USH2AO75445 RN7SL323P-201ENST00000494712 295 ntBASIC2□□□□□ -2.09
USH2AO75445 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC2□□□□□ -2.09
USH2AO75445 RN7SKP98-201ENST00000517070 156 ntBASIC2□□□□□ -2.09
USH2AO75445 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC2□□□□□ -2.09
USH2AO75445 AC005412.1-201ENST00000580812 1049 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms