Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 Z74021.1-201ENST00000423610 407 ntBASIC4.81□□□□□ -1.64
SNX3O60493 GTF2IP2-201ENST00000424290 697 ntBASIC4.81□□□□□ -1.64
SNX3O60493 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX3O60493 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX3O60493 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX3O60493 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX3O60493 AC011476.1-201ENST00000466725 307 ntBASIC4.81□□□□□ -1.64
SNX3O60493 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AC010468.3-201ENST00000508225 458 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AC138866.2-201ENST00000508650 584 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 RNU6-1102P-201ENST00000516149 96 ntBASIC4.81□□□□□ -1.64
SNX3O60493 RNU6-941P-201ENST00000516346 108 ntBASIC4.81□□□□□ -1.64
SNX3O60493 RNA5SP392-201ENST00000516905 112 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AC004923.2-201ENST00000529649 369 ntBASIC4.81□□□□□ -1.64
SNX3O60493 OR4R2P-201ENST00000530815 597 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.81□□□□□ -1.64
SNX3O60493 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.81□□□□□ -1.64
SNX3O60493 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX3O60493 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX3O60493 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.81□□□□□ -1.64
SNX3O60493 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.81□□□□□ -1.64
SNX3O60493 AC015849.2-201ENST00000605738 409 ntBASIC4.81□□□□□ -1.64
SNX3O60493 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.81□□□□□ -1.64
SNX3O60493 AC009237.17-201ENST00000618111 748 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AL645927.2-201ENST00000618350 349 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AL445493.3-201ENST00000619568 477 ntBASIC4.81□□□□□ -1.64
SNX3O60493 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX3O60493 AC021106.3-201ENST00000623925 531 ntBASIC4.81□□□□□ -1.64
SNX3O60493 AC097372.4-201ENST00000625025 466 ntBASIC4.81□□□□□ -1.64
SNX3O60493 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
SNX3O60493 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNX3O60493 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.81□□□□□ -1.64
SNX3O60493 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
SNX3O60493 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNX3O60493 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 RNA5SP234-201ENST00000363916 119 ntBASIC4.8□□□□□ -1.64
SNX3O60493 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX3O60493 EIF2S2P3-201ENST00000428356 999 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 PRPF38AP2-201ENST00000438179 851 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 TIMM8BP2-201ENST00000445940 251 ntBASIC4.8□□□□□ -1.64
SNX3O60493 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.8□□□□□ -1.64
SNX3O60493 PSMC1P13-201ENST00000458195 985 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AL136038.1-201ENST00000497246 351 ntBASIC4.8□□□□□ -1.64
SNX3O60493 CDH12P2-201ENST00000504393 298 ntBASIC4.8□□□□□ -1.64
SNX3O60493 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.8□□□□□ -1.64
SNX3O60493 AC109481.1-201ENST00000509173 282 ntBASIC4.8□□□□□ -1.64
SNX3O60493 RFPL4AP5-201ENST00000514977 504 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX3O60493 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX3O60493 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 AC093014.1-201ENST00000548926 724 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 AC002310.3-201ENST00000569728 723 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AC090079.2-201ENST00000575289 768 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AC138207.8-204ENST00000579588 527 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX3O60493 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX3O60493 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX3O60493 ZNF92P2-201ENST00000600543 1059 ntBASIC4.8□□□□□ -1.64
SNX3O60493 MIR1264-201ENST00000616374 69 ntBASIC4.8□□□□□ -1.64
SNX3O60493 AC020978.9-201ENST00000624380 1141 ntBASIC4.8□□□□□ -1.64
SNX3O60493 CASC19-274ENST00000642018 970 ntBASIC4.8□□□□□ -1.64
SNX3O60493 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SNX3O60493 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX3O60493 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms