Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHB11Q9Y5F2 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 RNU6-251P-201ENST00000363235 104 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 RNU6-254P-201ENST00000363377 107 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 Y_RNA.381-201ENST00000365666 102 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 Y_RNA.422-201ENST00000384054 114 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 Y_RNA.474-201ENST00000384341 102 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 SNORA11.5-201ENST00000408163 128 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 RNU6-272P-201ENST00000411028 104 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 GAPDHP19-201ENST00000431768 1005 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 GPM6BP2-201ENST00000432046 144 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 RPL14P5-201ENST00000436474 730 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 RPL5P25-201ENST00000441148 775 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 GPM6BP1-201ENST00000446387 144 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 RNU6-261P-201ENST00000459506 102 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC079193.1-201ENST00000460497 588 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AL161747.1-201ENST00000480068 358 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 TECRP2-201ENST00000503270 928 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 OR7E163P-201ENST00000505943 894 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 Vault.3-201ENST00000516676 95 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC008966.2-201ENST00000606157 453 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AL031777.2-201ENST00000611953 196 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AL080312.2-201ENST00000613001 630 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC010329.1-201ENST00000593903 8328 ntBASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 AC091544.5-201ENST00000620192 3815 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 Y_RNA.315-201ENST00000365117 102 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 SNORA69-201ENST00000383895 132 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 RNU6-1160P-201ENST00000384546 104 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 RNU6-1151P-201ENST00000384684 107 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 MIR551B-201ENST00000384984 96 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 RPS3AP5-201ENST00000389400 821 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 RNU1-149P-201ENST00000390870 161 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 RPL7P58-201ENST00000402913 758 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 AL590290.1-201ENST00000405336 380 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 AL162578.1-201ENST00000406202 378 ntBASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHB11Q9Y5F2 MIR548P-201ENST00000408336 84 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms