Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 AC114546.3-201ENST00000623582 1734 ntBASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 AC004014.2-201ENST00000623718 5122 ntBASIC2.03□□□□□ -2.09
LCE3DQ9BYE3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 SF3A3P1-201ENST00000446317 1477 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 GNL2P1-201ENST00000451274 2190 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AL391380.1-201ENST00000439300 1432 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AC241584.2-201ENST00000637142 2090 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 EEF1A1P3-201ENST00000417549 1385 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ZNF652P1-201ENST00000442420 1309 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AC009951.1-201ENST00000623674 2614 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AC211476.4-201ENST00000275546 699 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RNU6-223P-201ENST00000362830 107 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 Y_RNA.231-201ENST00000364358 102 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 U3.12-201ENST00000364498 214 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RNU6-996P-201ENST00000365438 107 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RNU4-48P-201ENST00000365559 182 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 Y_RNA.384-201ENST00000383909 102 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 SNORA10B-201ENST00000384458 133 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RNU6-441P-201ENST00000384545 106 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RNU6-1160P-201ENST00000384546 104 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ARF4P3-201ENST00000397387 509 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 PMS2P5-201ENST00000398065 516 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 CD160-203ENST00000401557 705 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AL512430.3-201ENST00000405355 441 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 GAPDHP63-201ENST00000405405 1007 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RPSAP72-201ENST00000407020 358 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 MIR1296-201ENST00000408136 92 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 MIR1269A-201ENST00000408636 105 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 TTLL11-IT1-201ENST00000411790 1052 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC2.02□□□□□ -2.09
LCE3DQ9BYE3 AC002367.1-201ENST00000416765 405 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms