Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LINC00993-201ENST00000420453 540 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AL359265.1-201ENST00000440296 795 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AL591363.1-201ENST00000450091 483 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 DHFRP3-201ENST00000455595 559 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AC110768.1-201ENST00000509222 400 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AC026367.3-201ENST00000619032 590 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AC005618.4-201ENST00000625053 554 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AC106871.1-201ENST00000568324 3102 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 AL583835.1-201ENST00000399570 407 ntBASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 NPM1P34-201ENST00000428821 893 ntBASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 MRPL50P1-201ENST00000431951 384 ntBASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 ABCF2P2-201ENST00000450549 296 ntBASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 SNORA70.24-201ENST00000517233 118 ntBASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 RNU6-709P-201ENST00000517257 104 ntBASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CSMD1Q96PZ7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AP000907.1-201ENST00000428428 510 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AC027369.5-201ENST00000533838 755 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AC107982.3-201ENST00000584957 985 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AC021876.1-201ENST00000425959 359 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 AP001160.4-201ENST00000596971 382 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 SRGNP1-201ENST00000603392 451 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 SDHCP2-201ENST00000398565 501 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 EIF4A1P3-201ENST00000411521 244 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 NPM1P36-201ENST00000415681 835 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 RN7SL429P-201ENST00000479090 223 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 RN7SL489P-201ENST00000486185 223 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 RN7SL327P-201ENST00000488659 223 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 RPS27AP13-201ENST00000498403 237 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 RN7SL853P-201ENST00000617250 223 ntBASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CSMD1Q96PZ7 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 ZNF285B-201ENST00000561698 1767 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 SNORA73.2-201ENST00000364946 201 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 RN7SKP17-201ENST00000411242 351 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AL158827.1-201ENST00000416300 391 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 SETP6-201ENST00000479329 568 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AL137843.1-201ENST00000605078 385 ntBASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CSMD1Q96PZ7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms