Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AL513325.1-201ENST00000417716 1034 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 EIF4A1P1-201ENST00000420241 934 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 SRSF1P1-201ENST00000424058 520 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 VTI1BP4-201ENST00000427516 527 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 CYCSP11-201ENST00000436426 315 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC012075.1-201ENST00000436549 580 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AL031313.1-201ENST00000448435 256 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 MTND2P8-201ENST00000450555 1025 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 RANP1-206ENST00000455094 651 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 PSMC1P13-201ENST00000458195 985 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC020898.1-201ENST00000474167 787 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC068587.2-201ENST00000478386 781 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 HMGN1P9-201ENST00000515212 298 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AP001207.2-201ENST00000519490 539 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AL132857.1-201ENST00000555180 708 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC009027.1-201ENST00000604510 479 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 Z82195.1-201ENST00000604558 398 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AC010245.2-201ENST00000606908 1167 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AP004607.9-201ENST00000618202 316 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 MIR8080-201ENST00000622224 89 ntBASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDK5RAP3Q96JB5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AL132640.2-201ENST00000559968 1698 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 HSPA8P15-201ENST00000401676 786 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC023128.2-201ENST00000420880 1223 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 ELOCP13-201ENST00000443934 329 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AL139824.2-201ENST00000458731 1095 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 RPL35AP19-201ENST00000469425 329 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 RPS27AP16-201ENST00000492222 470 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 SCARNA20.4-201ENST00000516969 131 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 FTH1P11-201ENST00000517577 551 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 CDC42P3-201ENST00000518493 633 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 OR11H3P-201ENST00000554547 982 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 MIR4789-201ENST00000577469 82 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 RN7SL356P-201ENST00000582228 248 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 MIR4310-201ENST00000582950 57 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 RN7SL622P-201ENST00000585292 275 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC108738.1-201ENST00000603703 237 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AL160237.3-201ENST00000604114 1013 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC098935.2-201ENST00000604222 466 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AL589674.2-201ENST00000604304 337 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC009974.1-201ENST00000608881 455 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC145207.9-201ENST00000623802 325 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AC135068.5-201ENST00000624197 983 ntBASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP3Q96JB5 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.06□□□□□ -1.44
CDK5RAP3Q96JB5 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms