Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AL359922.3-201ENST00000624779 1670 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 CASC19-281ENST00000642118 1554 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AC008549.2-201ENST00000333482 706 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 RNU1-108P-201ENST00000362556 161 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 Z97832.1-201ENST00000402490 328 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AL357515.1-201ENST00000402967 542 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AL592291.1-201ENST00000403830 352 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 MTND4LP21-201ENST00000415303 295 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 BMS1P13-201ENST00000417301 885 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 PDSS1P1-201ENST00000422953 1114 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AL034379.1-201ENST00000423216 253 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 COPS8P2-201ENST00000473228 627 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 RN7SL222P-201ENST00000476452 299 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AC113398.2-201ENST00000507630 558 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AC092490.3-201ENST00000545370 572 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 MIR3691-201ENST00000578066 90 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AL627230.1-201ENST00000613077 211 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AL591926.8-201ENST00000616876 211 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 AC004808.2-201ENST00000627965 773 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 THAP12P4-201ENST00000528321 2266 ntBASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
CCDC50Q8IVM0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CCDC50Q8IVM0 AC008758.3-201ENST00000507003 1829 ntBASIC5.09□□□□□ -1.6
CCDC50Q8IVM0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 MAPK10-303ENST00000641324 3959 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 MTCO1P11-201ENST00000429111 1528 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AL672167.1-203ENST00000641299 2975 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 MIR195-201ENST00000385194 87 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 MIR137-201ENST00000385223 102 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 ATG4AP1-201ENST00000416893 538 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 RHOT1P3-201ENST00000436571 331 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC069285.2-201ENST00000440210 275 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC000111.2-201ENST00000448200 210 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AL591363.1-201ENST00000450091 483 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 HMGB3P13-201ENST00000511263 607 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 RNA5SP92-201ENST00000516437 110 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 RNU6-709P-201ENST00000517257 104 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC007225.2-201ENST00000562529 256 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 ATP5J2P6-201ENST00000565203 266 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC011447.4-201ENST00000587562 111 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC067838.1-201ENST00000606064 577 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC026979.4-201ENST00000606555 645 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 AC091979.2-201ENST00000607514 214 ntBASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC50Q8IVM0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 CR382285.2-201ENST00000624662 1495 ntBASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 AC092111.2-201ENST00000611627 1414 ntBASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 MIR448-201ENST00000362131 111 ntBASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 RNA5SP428-201ENST00000365129 132 ntBASIC5.07□□□□□ -1.6
CCDC50Q8IVM0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms