Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC073534.2-201ENST00000620377 381 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC099494.2-201ENST00000623371 978 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC005609.4-201ENST00000625071 447 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AL359955.1-201ENST00000455242 3275 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AP005435.3-201ENST00000531260 3198 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 HSPD1P14-201ENST00000432666 1618 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 RNU6-609P-201ENST00000365459 107 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 GAPDHP15-201ENST00000398586 975 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 SNORA81-201ENST00000408493 178 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 RNA5SP487-201ENST00000410186 122 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 BX664727.1-201ENST00000416024 466 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 QRSL1P2-201ENST00000418582 964 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC092651.1-201ENST00000426110 312 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 MTND2P4-201ENST00000445034 1004 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 TPT1P13-201ENST00000449760 499 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 HMGN1P8-201ENST00000463578 288 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC010468.3-201ENST00000508225 458 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC093755.1-201ENST00000512950 1023 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 SNORA19.3-201ENST00000516165 130 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 RNU6-311P-201ENST00000516224 102 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 SNORA70.17-201ENST00000516449 133 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC005000.1-201ENST00000536192 288 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC024940.3-201ENST00000538551 316 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 ZNF321P-202ENST00000550843 495 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 VN1R78P-201ENST00000597393 564 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AL160237.3-201ENST00000604114 1013 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AL355802.4-201ENST00000607635 548 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 OR51C1P-201ENST00000608504 942 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 MIR378J-201ENST00000611988 109 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 HULC.1-201ENST00000612720 240 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 AC010435.1-201ENST00000623353 1177 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 BX649567.1-201ENST00000642071 1134 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 KYNUP3-201ENST00000574386 1341 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 INTS6P1-201ENST00000504674 2530 ntBASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYCE2Q6PIF2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 RN7SKP149-201ENST00000363008 344 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 RNU5E-10P-201ENST00000363506 118 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 RNVU1-6-201ENST00000364688 164 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 RNU6-192P-201ENST00000391253 100 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 AC096921.1-201ENST00000411661 375 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 BTF3L4P1-201ENST00000413813 468 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 TRIM60P17-201ENST00000415181 719 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 TIMM9P2-201ENST00000419324 266 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 NANOGP5-201ENST00000424456 877 ntBASIC5.67□□□□□ -1.5
SYCE2Q6PIF2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms