Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LRRK2Q5S007 WBP11P1-201ENST00000562560 1931 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRRK2Q5S007 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LRRK2Q5S007 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRRK2Q5S007 PTMAP5-201ENST00000393073 333 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 NDUFB4P4-201ENST00000404822 243 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 U3.35-201ENST00000408405 208 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 AC092647.1-201ENST00000420654 287 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 RPL19P16-201ENST00000433839 588 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 snoU13.29-201ENST00000459370 104 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 RN7SL189P-201ENST00000468631 289 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.11□□□□□ -1.75
LRRK2Q5S007 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.11□□□□□ -1.75
LRRK2Q5S007 RN7SL703P-201ENST00000578485 302 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 AC084757.4-201ENST00000616350 526 ntBASIC4.11□□□□□ -1.75
LRRK2Q5S007 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 RNA5SP432-201ENST00000362480 116 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 RNA5SP366-201ENST00000365454 123 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 Z98745.1-201ENST00000402553 494 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 RN7SKP33-201ENST00000410942 340 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 NPM1P36-201ENST00000415681 835 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AL356276.2-201ENST00000435919 558 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC053481.1-201ENST00000467217 306 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 SLC25A51P1-201ENST00000468432 871 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 RNU1-6P-201ENST00000516290 144 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC019176.2-201ENST00000611579 315 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AL161909.1-201ENST00000397390 712 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 Z92545.1-201ENST00000411782 234 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 RN7SL558P-201ENST00000497468 299 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 MTND4LP31-201ENST00000514859 294 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 HMGN1P9-201ENST00000515212 298 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 IGHVIII-13-1-201ENST00000517613 291 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 MIR4301-201ENST00000577203 66 ntBASIC4.1□□□□□ -1.75
LRRK2Q5S007 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.1□□□□□ -1.75
LRRK2Q5S007 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRRK2Q5S007 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 ZNF137P-201ENST00000456718 1920 ntBASIC4.09□□□□□ -1.75
LRRK2Q5S007 MT-RNR1-201ENST00000389680 954 ntBASIC4.09□□□□□ -1.75
LRRK2Q5S007 U3.28-201ENST00000391249 210 ntBASIC4.09□□□□□ -1.75
LRRK2Q5S007 RNU6-628P-201ENST00000410675 107 ntBASIC4.09□□□□□ -1.75
LRRK2Q5S007 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 NFYAP1-201ENST00000431953 972 ntBASIC4.09□□□□□ -1.75
LRRK2Q5S007 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 RPL7P41-201ENST00000485823 957 ntBASIC4.09□□□□□ -1.75
LRRK2Q5S007 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 AL139254.3-201ENST00000641097 674 ntBASIC4.09□□□□□ -1.75
LRRK2Q5S007 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC4.09□□□□□ -1.75
LRRK2Q5S007 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRRK2Q5S007 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRRK2Q5S007 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms