Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.73□□□□□ -1.65
SCN1BQ07699 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SCN1BQ07699 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.73□□□□□ -1.65
SCN1BQ07699 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN1BQ07699 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.73□□□□□ -1.65
SCN1BQ07699 MIR4311-201ENST00000580794 100 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AC067773.1-201ENST00000603284 1094 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 MIR6071-201ENST00000616741 78 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 MIR6839-201ENST00000620425 113 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 FO681491.1-202ENST00000623392 737 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC083865.1-201ENST00000636634 831 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 AC087565.3-203ENST00000641018 837 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 CASC19-222ENST00000641321 1173 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.73□□□□□ -1.65
SCN1BQ07699 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SCN1BQ07699 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.73□□□□□ -1.65
SCN1BQ07699 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SCN1BQ07699 AL031119.1-201ENST00000404707 1879 ntBASIC4.73□□□□□ -1.65
SCN1BQ07699 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN1BQ07699 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCN1BQ07699 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 MAPK10-304ENST00000641341 3984 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCN1BQ07699 DDX18P3-201ENST00000404856 2007 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 GAPDHP24-201ENST00000328713 983 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCN1BQ07699 AC019155.1-201ENST00000382242 574 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SCN1BQ07699 VN1R12P-201ENST00000403778 876 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 MIR1303-201ENST00000408625 86 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 UBE2V1P11-201ENST00000411559 285 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AL158825.1-201ENST00000414735 521 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 VN1R42P-201ENST00000424651 344 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AL138785.1-201ENST00000425821 331 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 ARL4AP4-201ENST00000434170 518 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 TMX2P1-201ENST00000436507 708 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 RPL35AP21-201ENST00000437667 333 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 BTF3P6-201ENST00000448054 499 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AP006222.1-205ENST00000450734 457 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 OR52A4P-201ENST00000472867 958 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 CBX1P5-201ENST00000475330 559 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AL161747.1-201ENST00000480068 358 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AC022133.1-201ENST00000490961 571 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 NENFP3-201ENST00000503735 313 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AC109481.1-201ENST00000509173 282 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.72□□□□□ -1.65
SCN1BQ07699 SNORA70.20-201ENST00000516848 126 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN1BQ07699 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN1BQ07699 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.72□□□□□ -1.65
SCN1BQ07699 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN1BQ07699 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCN1BQ07699 AC106785.3-201ENST00000564064 847 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCN1BQ07699 AC015802.2-201ENST00000589690 189 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AC063977.5-201ENST00000601044 974 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN1BQ07699 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN1BQ07699 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN1BQ07699 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SCN1BQ07699 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCN1BQ07699 AL118496.1-201ENST00000440201 1812 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 AL133268.1-201ENST00000405676 1401 ntBASIC4.72□□□□□ -1.65
SCN1BQ07699 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SCN1BQ07699 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN1BQ07699 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 OR9G4-201ENST00000302957 984 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 RN7SKP187-201ENST00000365536 330 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 299.2 ms