Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH13P55290 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH13P55290 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 HSPA8P17-201ENST00000427029 1382 ntBASIC4.99□□□□□ -1.61
CDH13P55290 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH13P55290 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH13P55290 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH13P55290 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH13P55290 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CDH13P55290 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CDH13P55290 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CDH13P55290 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH13P55290 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CDH13P55290 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH13P55290 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH13P55290 MIR600-201ENST00000385007 98 ntBASIC4.98□□□□□ -1.61
CDH13P55290 MIR320B1-201ENST00000390209 79 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC013442.1-201ENST00000397347 228 ntBASIC4.98□□□□□ -1.61
CDH13P55290 RPS27AP11-201ENST00000402798 447 ntBASIC4.98□□□□□ -1.61
CDH13P55290 RN7SKP293-201ENST00000411389 296 ntBASIC4.98□□□□□ -1.61
CDH13P55290 RPL35AP24-201ENST00000413846 330 ntBASIC4.98□□□□□ -1.61
CDH13P55290 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH13P55290 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH13P55290 AC079807.1-201ENST00000429993 481 ntBASIC4.98□□□□□ -1.61
CDH13P55290 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH13P55290 RPL34P6-201ENST00000432390 345 ntBASIC4.98□□□□□ -1.61
CDH13P55290 RN7SL205P-201ENST00000490174 284 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC090568.1-201ENST00000509499 856 ntBASIC4.98□□□□□ -1.61
CDH13P55290 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH13P55290 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH13P55290 AC105031.1-201ENST00000518550 476 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH13P55290 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH13P55290 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH13P55290 AC093510.2-201ENST00000562820 896 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH13P55290 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH13P55290 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH13P55290 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH13P55290 AF230666.2-201ENST00000602328 725 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC079880.2-201ENST00000603790 1213 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH13P55290 AL133445.2-201ENST00000611191 527 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC004477.3-201ENST00000614061 590 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC037198.3-201ENST00000616754 526 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AP001642.1-201ENST00000624727 2117 ntBASIC4.98□□□□□ -1.61
CDH13P55290 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH13P55290 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 CASC19-221ENST00000641309 1382 ntBASIC4.98□□□□□ -1.61
CDH13P55290 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.98□□□□□ -1.61
CDH13P55290 AC104260.2-201ENST00000623551 3497 ntBASIC4.98□□□□□ -1.61
CDH13P55290 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 AL672167.1-204ENST00000641875 3017 ntBASIC4.98□□□□□ -1.61
CDH13P55290 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH13P55290 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH13P55290 ZNF652P1-201ENST00000442420 1309 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH13P55290 SCARNA15-201ENST00000607520 4325 ntBASIC4.97□□□□□ -1.61
CDH13P55290 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CDH13P55290 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 AC011447.7-201ENST00000624228 1590 ntBASIC4.97□□□□□ -1.61
CDH13P55290 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 RNU6-252P-201ENST00000363232 107 ntBASIC4.97□□□□□ -1.61
CDH13P55290 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 SNORA2.3-201ENST00000383920 135 ntBASIC4.97□□□□□ -1.61
CDH13P55290 SNORA67-201ENST00000384423 137 ntBASIC4.97□□□□□ -1.61
CDH13P55290 RNU6-225P-201ENST00000384613 103 ntBASIC4.97□□□□□ -1.61
CDH13P55290 MIR1182-201ENST00000408363 97 ntBASIC4.97□□□□□ -1.61
CDH13P55290 RNA5SP178-201ENST00000410380 128 ntBASIC4.97□□□□□ -1.61
CDH13P55290 RN7SKP222-201ENST00000410651 315 ntBASIC4.97□□□□□ -1.61
CDH13P55290 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDH13P55290 AC007738.1-201ENST00000413892 348 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH13P55290 OR5M12P-201ENST00000423388 929 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AC093655.2-201ENST00000425735 631 ntBASIC4.97□□□□□ -1.61
CDH13P55290 NANOGP4-201ENST00000427230 913 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH13P55290 AC104843.2-201ENST00000427666 297 ntBASIC4.97□□□□□ -1.61
CDH13P55290 UBE2V1P6-201ENST00000430840 422 ntBASIC4.97□□□□□ -1.61
CDH13P55290 RPL7L1P9-201ENST00000431298 745 ntBASIC4.97□□□□□ -1.61
CDH13P55290 MTND2P2-201ENST00000434633 945 ntBASIC4.97□□□□□ -1.61
CDH13P55290 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH13P55290 RPL35AP21-201ENST00000437667 333 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms