Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 THAP12P5-201ENST00000405864 2275 ntBASIC5.03□□□□□ -1.6
CENPAP49450 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.03□□□□□ -1.6
CENPAP49450 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.03□□□□□ -1.6
CENPAP49450 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CENPAP49450 BX005019.1-201ENST00000561881 1810 ntBASIC5.03□□□□□ -1.6
CENPAP49450 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 RNU6-452P-201ENST00000384406 107 ntBASIC5.03□□□□□ -1.6
CENPAP49450 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 ANAPC10P1-201ENST00000395991 556 ntBASIC5.03□□□□□ -1.6
CENPAP49450 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.03□□□□□ -1.6
CENPAP49450 AL133482.1-201ENST00000415988 498 ntBASIC5.03□□□□□ -1.6
CENPAP49450 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 LINC01347-201ENST00000417964 355 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.03□□□□□ -1.6
CENPAP49450 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.03□□□□□ -1.6
CENPAP49450 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.03□□□□□ -1.6
CENPAP49450 AC115283.1-201ENST00000427353 400 ntBASIC5.03□□□□□ -1.6
CENPAP49450 ETF1P3-201ENST00000430422 1160 ntBASIC5.03□□□□□ -1.6
CENPAP49450 MTND2P40-201ENST00000436718 841 ntBASIC5.03□□□□□ -1.6
CENPAP49450 RPS10P18-201ENST00000442662 495 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 MED28P3-201ENST00000444288 531 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.03□□□□□ -1.6
CENPAP49450 AL035551.1-201ENST00000446931 348 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AL596266.1-201ENST00000448132 400 ntBASIC5.03□□□□□ -1.6
CENPAP49450 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.03□□□□□ -1.6
CENPAP49450 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 Z95152.1-201ENST00000453556 656 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.03□□□□□ -1.6
CENPAP49450 APOOP2-201ENST00000461561 539 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.03□□□□□ -1.6
CENPAP49450 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.03□□□□□ -1.6
CENPAP49450 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 AC091163.3-201ENST00000518269 1144 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC026407.1-201ENST00000518369 204 ntBASIC5.03□□□□□ -1.6
CENPAP49450 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.03□□□□□ -1.6
CENPAP49450 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 AP004609.2-201ENST00000532177 190 ntBASIC5.03□□□□□ -1.6
CENPAP49450 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.03□□□□□ -1.6
CENPAP49450 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 AL109741.3-201ENST00000561748 592 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AGGF1P5-201ENST00000567900 919 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.03□□□□□ -1.6
CENPAP49450 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.03□□□□□ -1.6
CENPAP49450 AC092121.1-201ENST00000569452 202 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CENPAP49450 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC073387.2-201ENST00000604797 784 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AL157392.4-201ENST00000609756 345 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC129778.1-202ENST00000623812 261 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AC024023.1-201ENST00000624530 922 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AL591379.1-207ENST00000635982 261 ntBASIC5.03□□□□□ -1.6
CENPAP49450 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.03□□□□□ -1.6
CENPAP49450 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CENPAP49450 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.02□□□□□ -1.61
CENPAP49450 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CENPAP49450 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
CENPAP49450 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CENPAP49450 AL121950.1-201ENST00000624993 2077 ntBASIC5.02□□□□□ -1.61
CENPAP49450 ZNF29P-201ENST00000225587 168 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AL159987.1-201ENST00000347911 293 ntBASIC5.02□□□□□ -1.61
CENPAP49450 RNA5SP273-201ENST00000362484 113 ntBASIC5.02□□□□□ -1.61
CENPAP49450 RNU5B-1-201ENST00000363286 116 ntBASIC5.02□□□□□ -1.61
CENPAP49450 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.02□□□□□ -1.61
CENPAP49450 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
CENPAP49450 SNORA48.4-201ENST00000391089 134 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AC093719.1-202ENST00000392735 373 ntBASIC5.02□□□□□ -1.61
CENPAP49450 GPS2P1-201ENST00000411761 986 ntBASIC5.02□□□□□ -1.61
CENPAP49450 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.02□□□□□ -1.61
CENPAP49450 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AL022331.1-201ENST00000429025 477 ntBASIC5.02□□□□□ -1.61
CENPAP49450 MTATP6P17-201ENST00000431030 672 ntBASIC5.02□□□□□ -1.61
CENPAP49450 HMGB3P24-201ENST00000433260 622 ntBASIC5.02□□□□□ -1.61
CENPAP49450 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.02□□□□□ -1.61
CENPAP49450 MTCO1P53-201ENST00000441633 699 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms