Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CX3CR1P49238 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 RNA5SP228-201ENST00000516232 133 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 HMGB1P19-201ENST00000517578 577 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CR1P49238 OR7E128P-201ENST00000532736 1024 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AC007225.2-201ENST00000562529 256 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.32□□□□□ -1.72
CX3CR1P49238 CYCSP40-201ENST00000575927 294 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AC009303.3-201ENST00000591103 736 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 MIR6768-201ENST00000610734 72 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AL133370.2-201ENST00000619934 439 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AC004808.2-201ENST00000627965 773 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CX3CR1P49238 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CX3CR1P49238 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.32□□□□□ -1.72
CX3CR1P49238 AP001273.1-201ENST00000624493 3152 ntBASIC4.32□□□□□ -1.72
CX3CR1P49238 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
CX3CR1P49238 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.31□□□□□ -1.72
CX3CR1P49238 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CX3CR1P49238 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.31□□□□□ -1.72
CX3CR1P49238 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 RNA5SP455-201ENST00000365190 119 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CX3CR1P49238 AP000580.1-201ENST00000404439 358 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.31□□□□□ -1.72
CX3CR1P49238 U3.36-201ENST00000408418 213 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 RN7SKP206-201ENST00000410823 293 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 TMBIM7P-201ENST00000418074 855 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.31□□□□□ -1.72
CX3CR1P49238 AL590609.2-201ENST00000421430 368 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 FABP7P2-201ENST00000429946 379 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AC093716.1-201ENST00000435923 377 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.31□□□□□ -1.72
CX3CR1P49238 FHP1-201ENST00000442741 703 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 RPL34P20-201ENST00000442771 351 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 PTMAP3-201ENST00000447474 330 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 CCRL1P1-201ENST00000449542 1053 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.31□□□□□ -1.72
CX3CR1P49238 C1DP3-201ENST00000455013 423 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 RN7SL222P-201ENST00000476452 299 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AC079841.1-201ENST00000481228 950 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 RN7SL244P-201ENST00000493405 297 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 SNRPCP2-201ENST00000504370 475 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.31□□□□□ -1.72
CX3CR1P49238 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 TCP11X3P-202ENST00000514289 1254 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 RNA5SP43-201ENST00000516559 110 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 AC087888.1-201ENST00000550884 1254 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 NPM1P45-201ENST00000583151 559 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AC011447.4-201ENST00000587562 111 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CX3CR1P49238 AC087783.2-201ENST00000605070 562 ntBASIC4.31□□□□□ -1.72
CX3CR1P49238 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CX3CR1P49238 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CR1P49238 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CX3CR1P49238 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AC132825.1-201ENST00000463573 2247 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 DDX18P5-201ENST00000534547 1306 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AC107027.3-201ENST00000565095 3473 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 RNU4-44P-201ENST00000363050 141 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CR1P49238 Z97832.1-201ENST00000402490 328 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 CYCSP11-201ENST00000436426 315 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms