Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 SNORA35B-201ENST00000607417 129 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC004241.3-201ENST00000611728 517 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC243960.7-201ENST00000623532 707 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AP002967.1-201ENST00000624203 539 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AL353662.3-201ENST00000625131 237 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CSNK1A1P48729 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CSNK1A1P48729 MAPK10-263ENST00000641052 4307 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CSNK1A1P48729 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CSNK1A1P48729 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CSNK1A1P48729 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CSNK1A1P48729 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK1A1P48729 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK1A1P48729 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 RNU6-697P-201ENST00000363348 107 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 MIR1271-201ENST00000408537 86 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 OR5M12P-201ENST00000423388 929 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK1A1P48729 PRPF38AP2-201ENST00000438179 851 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 snoU13.20-201ENST00000459180 104 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC110749.1-201ENST00000462007 357 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 AL591473.1-201ENST00000464297 313 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 RN7SL809P-201ENST00000482040 297 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 NIP7P2-201ENST00000485801 544 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AP001960.1-201ENST00000506494 658 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 RNA5SP249-201ENST00000516127 99 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC027308.1-201ENST00000517993 110 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC005868.1-201ENST00000536421 331 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC087763.1-201ENST00000603391 286 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC023813.4-201ENST00000607580 580 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC015914.2-201ENST00000618167 288 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC022106.2-201ENST00000620114 757 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC012414.7-202ENST00000622705 1090 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK1A1P48729 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK1A1P48729 AC009643.2-201ENST00000603543 1448 ntBASIC4.36□□□□□ -1.71
CSNK1A1P48729 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK1A1P48729 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK1A1P48729 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK1A1P48729 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 AC099654.2-201ENST00000433031 1980 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK1A1P48729 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 AL121950.1-201ENST00000624993 2077 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK1A1P48729 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 UBBP2-201ENST00000376781 231 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 AL627308.1-201ENST00000435693 821 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 RPL7AP6-201ENST00000477943 801 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 RPL37AP8-201ENST00000494116 276 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 ENPP7P9-201ENST00000514456 627 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 AC138938.1-201ENST00000515431 782 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 AC107918.3-201ENST00000533272 382 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 SNORA74C-1-201ENST00000580726 201 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 OR7E18P-201ENST00000592589 702 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 AL008729.2-201ENST00000606393 473 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 AC091905.4-201ENST00000623432 202 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 AC109780.1-201ENST00000451768 1344 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK1A1P48729 SCN1A-220ENST00000641603 12506 ntBASIC4.35□□□□□ -1.71
CSNK1A1P48729 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CSNK1A1P48729 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms