Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ATF4P18848 TNPO1P2-201ENST00000426249 2665 ntBASIC5.89□□□□□ -1.47
ATF4P18848 AC022164.1-201ENST00000568767 2673 ntBASIC5.89□□□□□ -1.47
ATF4P18848 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.89□□□□□ -1.47
ATF4P18848 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ATF4P18848 MFSD8-227ENST00000641393 4069 ntBASIC5.89□□□□□ -1.47
ATF4P18848 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
ATF4P18848 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 DOCK11P1-201ENST00000553480 5932 ntBASIC5.88□□□□□ -1.47
ATF4P18848 ERCC6-202ENST00000374127 1782 ntBASIC5.88□□□□□ -1.47
ATF4P18848 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 AC024651.2-201ENST00000562480 2098 ntBASIC5.88□□□□□ -1.47
ATF4P18848 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 AMELY-202ENST00000383036 621 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 SNORA10-201ENST00000384084 133 ntBASIC5.88□□□□□ -1.47
ATF4P18848 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ATF4P18848 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ATF4P18848 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 RPS3AP3-201ENST00000411933 242 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AL357752.1-201ENST00000412817 349 ntBASIC5.88□□□□□ -1.47
ATF4P18848 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 OR4F2P-201ENST00000424047 938 ntBASIC5.88□□□□□ -1.47
ATF4P18848 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 MTND3P21-201ENST00000433774 331 ntBASIC5.88□□□□□ -1.47
ATF4P18848 CEACAMP1-201ENST00000434624 1035 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AC016734.1-201ENST00000436998 654 ntBASIC5.88□□□□□ -1.47
ATF4P18848 RPL22P17-201ENST00000438729 315 ntBASIC5.88□□□□□ -1.47
ATF4P18848 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.88□□□□□ -1.47
ATF4P18848 AC002381.1-201ENST00000447049 280 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 AC087312.1-201ENST00000471411 480 ntBASIC5.88□□□□□ -1.47
ATF4P18848 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.88□□□□□ -1.47
ATF4P18848 ACTR3P3-201ENST00000480448 893 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC5.88□□□□□ -1.47
ATF4P18848 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC5.88□□□□□ -1.47
ATF4P18848 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC5.88□□□□□ -1.47
ATF4P18848 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC5.88□□□□□ -1.47
ATF4P18848 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.88□□□□□ -1.47
ATF4P18848 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC5.88□□□□□ -1.47
ATF4P18848 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC5.88□□□□□ -1.47
ATF4P18848 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.88□□□□□ -1.47
ATF4P18848 AL109618.2-201ENST00000605527 211 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AC007684.1-201ENST00000609671 477 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 AC015819.1-201ENST00000613588 663 ntBASIC5.88□□□□□ -1.47
ATF4P18848 MIR6726-201ENST00000613751 61 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AC072046.2-201ENST00000618366 268 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC5.88□□□□□ -1.47
ATF4P18848 AC069234.4-201ENST00000621276 412 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AL445264.1-201ENST00000621719 171 ntBASIC5.88□□□□□ -1.47
ATF4P18848 AC000123.2-201ENST00000623124 461 ntBASIC5.88□□□□□ -1.47
ATF4P18848 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.88□□□□□ -1.47
ATF4P18848 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 C1D-202ENST00000407324 1379 ntTSL 3 BASIC5.88□□□□□ -1.47
ATF4P18848 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.88□□□□□ -1.47
ATF4P18848 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATF4P18848 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.88□□□□□ -1.47
ATF4P18848 AC093671.1-201ENST00000624981 2929 ntBASIC5.88□□□□□ -1.47
ATF4P18848 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.88□□□□□ -1.47
ATF4P18848 AC105114.1-201ENST00000624795 1862 ntBASIC5.88□□□□□ -1.47
ATF4P18848 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms