Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.61□□□□□ -1.35
PDGFAP04085 AC245014.2-201ENST00000603689 287 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 AC246785.4-201ENST00000605374 287 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 AL137000.1-201ENST00000610528 1244 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.61□□□□□ -1.35
PDGFAP04085 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 MIR3662-201ENST00000637030 95 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 CASC19-232ENST00000641480 1244 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 AP000547.3-204ENST00000588548 2523 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.61□□□□□ -1.35
PDGFAP04085 MRE11P1-201ENST00000464884 2127 ntBASIC6.61□□□□□ -1.35
PDGFAP04085 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDGFAP04085 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
PDGFAP04085 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 WNK1-220ENST00000574564 1401 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PDGFAP04085 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 Y_RNA.409-201ENST00000383990 98 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 RPL7AP51-201ENST00000422016 760 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AC008753.1-201ENST00000423096 284 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AL513185.2-201ENST00000425543 193 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 DYNLL1P7-201ENST00000429273 258 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AL136231.1-201ENST00000429407 730 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC009518.3-201ENST00000438972 253 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 CXCR2P1-202ENST00000443392 1074 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 RPS23P9-201ENST00000448848 438 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AC079448.1-201ENST00000449377 373 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.6□□□□□ -1.35
PDGFAP04085 AL034369.1-201ENST00000453808 477 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AC099670.1-201ENST00000455141 783 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AC002075.1-201ENST00000457396 676 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 RPS20P24-201ENST00000457473 361 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 RPL38P1-201ENST00000460914 211 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AP003385.3-201ENST00000472498 287 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 RBM43P1-201ENST00000476891 1081 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 RN7SL153P-201ENST00000486501 292 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AC007182.2-201ENST00000489251 402 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFAP04085 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 DCAF13P2-201ENST00000514188 555 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFAP04085 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC011840.5-201ENST00000582125 771 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AC103792.1-201ENST00000603591 919 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AL451049.1-201ENST00000608672 497 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 AL121809.2-201ENST00000613169 341 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 AC063952.1-203ENST00000634410 658 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFAP04085 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFAP04085 VPS35P1-201ENST00000563400 1518 ntBASIC6.6□□□□□ -1.35
PDGFAP04085 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PDGFAP04085 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms